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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:33.4TPM
GTEx:16.3RPKM
FANTOM5:24.8Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Medium
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA008435

  

Antibody HPA024230

  

Adipocytes

 Not detected   Medium  

Fibroblasts

 Medium   Not detected  

Peripheral nerve

 Not detected   Not detected  
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Medium
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA008435

  

Antibody HPA024230

  

Adipocytes

 Low   Low  

Fibroblasts

 Medium   Not detected  

Peripheral nerve

 Not detected   Low  
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

33.4
N/A Female, age 80 Sample 1
TPM: 22.8
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 21.8
N/A Female, age 57 Sample 3
TPM: 18.5
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 12.2
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 91.9
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

16.3

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 16.5
Samples: 350

Max RPKM: 124.5
Min RPKM: 0.8
Std RPKM: 17.4
Median RPKM: 11.4
GTEX-145MI-0426-SM-5O99V 60-69 years, female 124.5
GTEX-11ONC-2526-SM-5986W 60-69 years, male 122.1
GTEX-WVJS-0226-SM-4MVOU 50-59 years, male 105.2
GTEX-XQ3S-1626-SM-4WAYN 20-29 years, male 91.6
GTEX-13OVL-0326-SM-5IJCS 50-59 years, male 89.6
GTEX-ZDTS-0226-SM-5HL7Q 60-69 years, male 85.4
GTEX-13PLJ-0126-SM-5L3HU 60-69 years, female 83.0
GTEX-SSA3-0226-SM-32QPN 60-69 years, male 70.6
GTEX-111FC-0226-SM-5N9B8 60-69 years, male 64.2
GTEX-WL46-0326-SM-3LK6Y 50-59 years, male 63.6
Show all
Adipose - Visceral (Omentum)
RPKM: 16.0
Samples: 227

Max RPKM: 95.9
Min RPKM: 0.2
Std RPKM: 16.8
Median RPKM: 8.7
GTEX-YECK-1426-SM-5IFHE 60-69 years, male 95.9
GTEX-11PRG-1526-SM-5HL6Z 50-59 years, male 95.5
GTEX-11DYG-2026-SM-5EGGX 60-69 years, male 83.8
GTEX-11NV4-1426-SM-5BC4W 60-69 years, male 66.3
GTEX-ZDXO-2326-SM-5LU9W 60-69 years, male 60.9
GTEX-113JC-0726-SM-5GZZR 50-59 years, female 59.6
GTEX-11ZTS-1326-SM-5EQMA 60-69 years, female 55.3
GTEX-13112-1126-SM-5GCMY 50-59 years, male 54.9
GTEX-ZDTS-1826-SM-5S2N6 60-69 years, male 51.7
GTEX-12WSG-0426-SM-5FQSE 50-59 years, female 50.5
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

24.8

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 24.8
FF:10010-101C1 65,65,76 years, mixed 24.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.