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DNMBP

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:19.1TPM
GTEx:7.2RPKM
FANTOM5:11.3Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA037878

  

Endothelial cells

 Not detected  

Glandular cells

 Not detected  

Peripheral nerve/ganglion

 Low  
 
 

COLON - HPA RNA-seq

Average TPM

19.1
overview Male, age 54 Sample 1
TPM: 20.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 22.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 20.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 19.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 10.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 11.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 23.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 23
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 15.9
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 22.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 26.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 18.7
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 13.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

7.2

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 5.4
Samples: 149

Max RPKM: 10.5
Min RPKM: 3.1
Std RPKM: 1.2
Median RPKM: 5.2
GTEX-ZY6K-1326-SM-5GZWP 50-59 years, male 10.5
GTEX-11ZU8-1126-SM-5EQ5K 60-69 years, male 10.0
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 9.4
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 8.5
GTEX-13FHO-2726-SM-5K7VG 60-69 years, male 8.3
GTEX-14C39-1626-SM-5S2P4 40-49 years, male 8.3
GTEX-11P81-1426-SM-5P9JN 30-39 years, female 7.7
GTEX-12WSM-1426-SM-5GCPA 60-69 years, male 7.5
GTEX-WYVS-1126-SM-4SOJX 40-49 years, female 7.3
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 6.9
Show all
Colon - Transverse
RPKM: 8.5
Samples: 196

Max RPKM: 28.6
Min RPKM: 2.1
Std RPKM: 2.9
Median RPKM: 8.8
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 28.6
GTEX-13O21-2426-SM-5MR4A 50-59 years, male 14.2
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 14.1
GTEX-ZV7C-1526-SM-5NQ72 50-59 years, male 13.4
GTEX-ZLV1-1226-SM-4WWBX 60-69 years, female 13.2
GTEX-1122O-1526-SM-5N9CL 60-69 years, female 12.8
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 12.8
GTEX-WFG7-1526-SM-4LVMG 20-29 years, male 12.6
GTEX-Y5LM-1526-SM-4VDTA 40-49 years, female 12.6
GTEX-14DAR-1526-SM-5RQIX 50-59 years, male 12.5
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

11.3

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 11.3
FF:10014-101C5 62,83,84 years, mixed 11.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.