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RAPGEFL1

COLON - Expression summary

RNA expression
HPA:53.6TPM
GTEx:21.0RPKM
FANTOM5:13.6Tags Per Million

COLON - Annotated protein expression

Pending normal tissue analysis

COLON - HPA RNA-seq

Average TPM

53.6
overview Male, age 54 Sample 1
TPM: 51.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 51.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 51.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 67.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 12.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 35.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 73.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 77.4
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 25.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 54.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 64.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 52.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 77.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

21.0

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 2.4
Samples: 149

Max RPKM: 23.8
Min RPKM: 0.6
Std RPKM: 2.6
Median RPKM: 1.7
GTEX-Y5LM-1426-SM-5RQJL 40-49 years, female 23.8
GTEX-V955-1726-SM-4JBHF 60-69 years, male 16.8
GTEX-XBED-1726-SM-47JYO 60-69 years, male 10.8
GTEX-11ONC-1926-SM-5GU75 60-69 years, male 8.7
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 7.1
GTEX-11EQ9-1526-SM-5PNY7 30-39 years, male 7.0
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 6.8
GTEX-XUZC-1526-SM-4BRV4 30-39 years, female 6.1
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 5.7
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 5.2
Show all
Colon - Transverse
RPKM: 35.2
Samples: 196

Max RPKM: 85.3
Min RPKM: 0.9
Std RPKM: 25.6
Median RPKM: 40.2
GTEX-Y5LM-1526-SM-4VDTA 40-49 years, female 85.3
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 78.1
GTEX-1211K-1726-SM-5FQUJ 60-69 years, female 75.2
GTEX-S4Q7-0826-SM-4AD5E 20-29 years, male 75.1
GTEX-ZVT2-1926-SM-5GU5T 50-59 years, female 74.9
GTEX-ZT9W-1826-SM-51MQX 50-59 years, male 74.5
GTEX-PLZ5-1126-SM-3P613 50-59 years, male 74.1
GTEX-145LT-0926-SM-5LU9C 40-49 years, male 73.8
GTEX-14DAR-1526-SM-5RQIX 50-59 years, male 71.5
GTEX-1122O-1526-SM-5N9CL 60-69 years, female 70.7
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

13.6

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 13.6
FF:10014-101C5 62,83,84 years, mixed 13.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.