Fields »
ABOUT
HELP
BLOG
NUP88

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:14.3TPM
GTEx:11.0RPKM
FANTOM5:18.3Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Medium
Peripheral nerve:Medium
 

Antibody staining

Antibody HPA021816

  

Antibody CAB002209

  

Adipocytes

 Medium   Not detected  

Fibroblasts

 Medium   Not detected  

Peripheral nerve

 Medium   Not detected  
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Medium
Peripheral nerve:Medium
 

Antibody staining

Antibody HPA021816

  

Antibody CAB002209

  

Adipocytes

 Medium   Not detected  

Fibroblasts

 Medium   Not detected  

Peripheral nerve

 Medium   Not detected  
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

14.3
N/A Female, age 80 Sample 1
TPM: 8.5
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 13.3
N/A Female, age 57 Sample 3
TPM: 8.8
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 22.6
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 18.1
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

11.0

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 11.1
Samples: 350

Max RPKM: 18.3
Min RPKM: 6.9
Std RPKM: 2.1
Median RPKM: 10.8
GTEX-PWCY-1926-SM-3NB25 20-29 years, female 18.3
GTEX-QEG5-0326-SM-2S1PB 20-29 years, male 17.3
GTEX-QEL4-0326-SM-3GAE5 50-59 years, male 17.0
GTEX-T5JW-1726-SM-3GADN 20-29 years, female 16.9
GTEX-Q2AH-1726-SM-3NB2B 40-49 years, male 16.8
GTEX-ZTPG-0226-SM-5O99I 20-29 years, female 16.7
GTEX-TKQ1-1126-SM-4GIAZ 30-39 years, male 15.9
GTEX-O5YT-0226-SM-32PK5 20-29 years, male 15.5
GTEX-SNMC-1326-SM-2XCFK 20-29 years, male 15.5
GTEX-PWOO-2226-SM-2S1P1 40-49 years, female 15.2
Show all
Adipose - Visceral (Omentum)
RPKM: 11.0
Samples: 227

Max RPKM: 20.8
Min RPKM: 6.7
Std RPKM: 2.3
Median RPKM: 10.5
GTEX-Y5LM-0826-SM-4VDSW 40-49 years, female 20.8
GTEX-11WQK-1526-SM-5EGKN 50-59 years, male 18.8
GTEX-133LE-0926-SM-5P9J1 20-29 years, female 18.7
GTEX-ZLWG-0726-SM-5S2NG 50-59 years, female 17.4
GTEX-1339X-0726-SM-5L3FF 40-49 years, male 17.1
GTEX-Y114-1326-SM-4TT9A 50-59 years, female 16.4
GTEX-13PVQ-2226-SM-5L3G9 50-59 years, male 16.2
GTEX-ZA64-0926-SM-5HL7H 20-29 years, male 16.2
GTEX-ZT9W-1026-SM-57WG5 50-59 years, male 16.0
GTEX-ZTSS-1026-SM-5985N 40-49 years, male 15.6
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

18.3

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 18.3
FF:10010-101C1 65,65,76 years, mixed 18.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.