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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:156.5TPM
GTEx:118.4RPKM
FANTOM5:447.6Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Low
Chondrocytes:Low
Peripheral nerve:Not detected
 
 

Antibody staining

Antibody HPA008445

  

Antibody CAB016200

  

Antibody CAB021109

  

Antibody CAB047350

  

Adipocytes

 Medium   Not detected   Medium   Not detected  

Fibroblasts

 Medium   Not detected   Not detected  

Chondrocytes

 Medium   Medium  

Peripheral nerve

 Not detected  
          
       
       
       

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Medium
Peripheral nerve:Low
 
 

Antibody staining

Antibody HPA008445

  

Antibody CAB016200

  

Antibody CAB021109

  

Antibody CAB047350

  

Adipocytes

 Medium   Not detected   Medium   Not detected  

Fibroblasts

 Medium   Medium   Low   Not detected  

Peripheral nerve

 Medium   Low   Low  
          
       
       
       

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

156.5
N/A Female, age 80 Sample 1
TPM: 200.6
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 166.2
N/A Female, age 57 Sample 3
TPM: 141.7
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 159.6
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 114.5
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

118.4

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 113.5
Samples: 350

Max RPKM: 182.2
Min RPKM: 61.3
Std RPKM: 21.9
Median RPKM: 111.4
GTEX-11DXX-2326-SM-5Q5A2 60-69 years, female 182.2
GTEX-ZDTT-2626-SM-5S2OP 60-69 years, male 180.8
GTEX-Y5V6-2526-SM-5IFJV 60-69 years, male 176.9
GTEX-QEG5-0326-SM-2S1PB 20-29 years, male 164.9
GTEX-ZYVF-0226-SM-5GIEG 50-59 years, female 164.5
GTEX-S3XE-1626-SM-3K2AJ 50-59 years, male 164.4
GTEX-11P82-1726-SM-5Q5AT 20-29 years, male 164.1
GTEX-ZZ64-1626-SM-5E43W 20-29 years, male 163.7
GTEX-TKQ1-1126-SM-4GIAZ 30-39 years, male 161.9
GTEX-147F3-0626-SM-5NQ9I 50-59 years, female 161.1
Show all
Adipose - Visceral (Omentum)
RPKM: 125.8
Samples: 227

Max RPKM: 216.0
Min RPKM: 73.2
Std RPKM: 21.1
Median RPKM: 124.7
GTEX-Y5LM-0826-SM-4VDSW 40-49 years, female 216.0
GTEX-ZYVF-1026-SM-5E44V 50-59 years, female 201.2
GTEX-1339X-0726-SM-5L3FF 40-49 years, male 178.6
GTEX-U8XE-1926-SM-3DB98 30-39 years, male 175.1
GTEX-13FH7-1926-SM-5J2OL 50-59 years, female 168.4
GTEX-ZT9W-1026-SM-57WG5 50-59 years, male 167.9
GTEX-1128S-0926-SM-5GZZU 60-69 years, female 167.8
GTEX-132QS-0826-SM-5K7WV 60-69 years, male 164.5
GTEX-11WQK-1526-SM-5EGKN 50-59 years, male 162.9
GTEX-13PVQ-2226-SM-5L3G9 50-59 years, male 162.5
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

447.6

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 447.6
FF:10010-101C1 65,65,76 years, mixed 447.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.