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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

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Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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PATHOLOGY ATLAS GLIOMA

GENE/PROTEIN

Antibody validation

Dictionary

Glioma

GLIOMA - Survival analysis

Best separation

Median separation

Expression cutoff

99.3 FPKM 96.9 FPKM

3-year survival high

3% 5%

3-year survival low

10% 8%

Log-rank P value

4.06e-1 4.73e-1

Interactive survival scatter plot (individual patient data)




Stage:

TCGA RNA samples

Average FPKM

128.9

Number of samples

153

Samples

Sample

Description

FPKM

TCGA-28-5220-01A 67 years, male, white 981.9
TCGA-26-1442-01A 43 years, male, white 541.6
TCGA-06-5417-01A 45 years, female, white 514.6
TCGA-27-1835-01A 53 years, female, white 432.6
TCGA-15-1444-01A 21 years, male, white 431.5
TCGA-12-0821-01A 62 years, male, white 405.4
TCGA-12-1597-01B 62 years, female, white 401.1
TCGA-06-0749-01A 50 years, male, black or african american 378.0
TCGA-19-2629-01A 60 years, male, white 361.7
TCGA-14-0790-01B 64 years, female, white 361.3
TCGA-16-0846-01A 85 years, male, white 316.1
TCGA-27-2521-01A 34 years, male, white 315.9
TCGA-12-0618-01A 49 years, male, white 295.8
TCGA-06-0219-01A 67 years, male, white 286.9
TCGA-12-3652-01A 60 years, male, white 279.1
TCGA-06-0138-01A 43 years, male, white 264.8
TCGA-06-0649-01B 73 years, female, black or african american 259.4
TCGA-14-1825-01A 70 years, male, white 256.4
TCGA-06-5859-01A 63 years, male, white 245.2
TCGA-02-0047-01A 78 years, male, white 241.8
TCGA-28-5216-01A 52 years, male, white 229.6
TCGA-28-5207-01A 71 years, male, white 227.5
TCGA-08-0386-01A 74 years, male, white 215.9
TCGA-06-0132-01A 49 years, male, white 211.6
TCGA-06-0743-01A 69 years, male, white 206.7
TCGA-32-1970-01A 59 years, male, white 197.7
TCGA-06-5411-01A 51 years, male, white 197.2
TCGA-06-2558-01A 75 years, female, white 190.3
TCGA-28-1747-01C 44 years, male, white 186.1
TCGA-32-1980-01A 72 years, male, white 182.4
TCGA-19-2620-01A 70 years, male, white 180.1
TCGA-19-2624-01A 51 years, male, white 175.8
TCGA-27-1837-01A 36 years, male, white 175.6
TCGA-16-1045-01B 49 years, female, white 170.8
TCGA-41-4097-01A 63 years, female, white 170.5
TCGA-06-0646-01A 61 years, male, white 161.3
TCGA-06-2561-01A 53 years, female, white 161.3
TCGA-26-5135-01A 72 years, female, white 160.7
TCGA-41-2572-01A 67 years, male, white 160.5
TCGA-06-0178-01A 39 years, male, white 153.0
TCGA-06-5856-01A 58 years, male, white 151.6
TCGA-06-5416-01A 23 years, female, white 149.2
TCGA-06-1804-01A 81 years, female, white 149.0
TCGA-32-4213-01A 47 years, female, white 147.0
TCGA-06-2567-01A 65 years, male, white 146.4
TCGA-06-0141-01A 62 years, male, white 145.7
TCGA-76-4931-01A 70 years, female, white 145.4
TCGA-32-5222-01A 66 years, male, white 144.3
TCGA-06-5412-01A 78 years, female, white 143.4
TCGA-19-2619-01A 55 years, female, black or african american 139.1
TCGA-28-2514-01A 45 years, male, asian 136.6
TCGA-06-0187-01A 69 years, male, white 136.3
TCGA-06-0157-01A 63 years, female, white 134.5
TCGA-19-2625-01A 76 years, female, white 132.6
TCGA-76-4926-01B 68 years, male, white 130.3
TCGA-27-2526-01A 79 years, female, white 130.1
TCGA-06-2570-01A 21 years, female, white 128.4
TCGA-12-3653-01A 34 years, female, white 125.2
TCGA-76-4929-01A 76 years, female, white 124.9
TCGA-14-1034-01A 60 years, female 123.7
TCGA-06-0168-01A 59 years, female, white 117.3
TCGA-06-0156-01A 57 years, male, white 116.6
TCGA-26-5133-01A 59 years, male, white 116.1
TCGA-41-2571-01A 89 years, male, white 115.0
TCGA-06-0686-01A 53 years, male, white 113.5
TCGA-06-2557-01A 76 years, male, black or african american 112.9
TCGA-41-5651-01A 59 years, female, black or african american 112.7
TCGA-06-0238-01A 46 years, male, white 111.8
TCGA-28-5215-01A 62 years, female, white 111.4
TCGA-27-2519-01A 48 years, male, white 110.5
TCGA-14-1829-01A 57 years, male, black or african american 109.9
TCGA-26-5136-01B 78 years, female, white 107.0
TCGA-14-0781-01B 49 years, male, black or african american 102.3
TCGA-06-2559-01A 83 years, male, white 101.4
TCGA-32-1982-01A 76 years, female, white 100.7
TCGA-28-2499-01A 59 years, male, white 98.0
TCGA-27-1834-01A 56 years, male, white 96.9
TCGA-76-4925-01A 76 years, male, white 95.2
TCGA-26-5134-01A 74 years, male, white 94.7
TCGA-06-5418-01A 75 years, female, white 93.9
TCGA-28-5213-01A 72 years, male, white 91.4
TCGA-06-0882-01A 30 years, male, white 88.7
TCGA-02-2485-01A 53 years, male, black or african american 87.6
TCGA-06-0174-01A 54 years, male, white 85.9
TCGA-06-5413-01A 67 years, male, white 83.2
TCGA-27-2528-01A 62 years, male, white 82.5
TCGA-32-2615-01A 62 years, male, white 79.9
TCGA-06-5408-01A 54 years, female, white 79.8
TCGA-06-0184-01A 63 years, male, white 78.4
TCGA-26-5139-01A 65 years, female, white 75.8
TCGA-19-5960-01A 56 years, male, white 74.9
TCGA-28-1753-01A 53 years, male, white 74.2
TCGA-76-4932-01A 50 years, female, white 74.1
TCGA-27-1830-01A 57 years, male, white 74.0
TCGA-32-2632-01A 80 years, male, white 72.7
TCGA-28-5209-01A 66 years, female, white 70.1
TCGA-12-3650-01A 46 years, male, white 69.7
TCGA-06-0210-01A 72 years, female, white 69.0
TCGA-28-2509-01A 77 years, female, white 69.0
TCGA-19-1390-01A 63 years, female, white 64.9
TCGA-12-5295-01A 60 years, female, white 64.0
TCGA-06-0745-01A 59 years, male, white 62.9
TCGA-06-0129-01A 30 years, male, asian 60.7
TCGA-06-0750-01A 43 years, male, white 60.1
TCGA-06-2565-01A 59 years, male, asian 60.0
TCGA-06-5410-01A 72 years, female, white 58.4
TCGA-32-2634-01A 82 years, male, white 57.9
TCGA-41-3915-01A 48 years, male, white 57.6
TCGA-27-1832-01A 59 years, female, white 56.6
TCGA-26-5132-01A 74 years, male, white 56.5
TCGA-06-2564-01A 50 years, male, white 55.6
TCGA-06-0747-01A 53 years, male, white 54.3
TCGA-06-0158-01A 73 years, male, white 54.1
TCGA-06-5414-01A 61 years, male, white 53.8
TCGA-28-5204-01A 72 years, male, white 49.6
TCGA-28-2513-01A 69 years, female, white 48.5
TCGA-06-0645-01A 56 years, female, white 47.2
TCGA-14-0817-01A 69 years, female, white 45.7
TCGA-28-5208-01A 52 years, male, white 45.0
TCGA-14-1823-01A 58 years, female, white 45.0
TCGA-06-0211-01B 47 years, male, white 44.5
TCGA-06-5858-01A 45 years, female, white 43.7
TCGA-15-0742-01A 65 years, male, white 43.1
TCGA-32-2616-01A 48 years, female, white 42.5
TCGA-14-2554-01A 52 years, female, white 38.7
TCGA-06-0878-01A 74 years, male, white 38.2
TCGA-27-2523-01A 63 years, male, white 36.2
TCGA-12-5299-01A 56 years, female, white 36.0
TCGA-32-2638-01A 67 years, male, white 34.9
TCGA-02-2483-01A 43 years, male, asian 33.9
TCGA-76-4927-01A 58 years, male, white 32.4
TCGA-27-1831-01A 66 years, male, white 31.8
TCGA-12-0619-01A 60 years, male, white 31.2
TCGA-06-0190-01A 62 years, male, white 30.0
TCGA-27-2524-01A 56 years, male, white 29.8
TCGA-19-4065-01A 36 years, male, white 28.4
TCGA-14-0789-01A 54 years, male, white 27.8
TCGA-19-1787-01B 49 years, male, white 27.0
TCGA-02-0055-01A 62 years, female, white 26.9
TCGA-06-0125-01A 63 years, female, white 26.6
TCGA-06-2562-01A 81 years, male, white 26.4
TCGA-06-0744-01A 67 years, male, white 24.0
TCGA-06-0139-01A 40 years, male, white 21.8
TCGA-06-2563-01A 72 years, female, white 21.8
TCGA-06-0644-01A 71 years, male, black or african american 21.6
TCGA-76-4928-01B 85 years, female, white 20.5
TCGA-02-2486-01A 64 years, male, white 20.0
TCGA-12-0616-01A 36 years, female, white 19.5
TCGA-14-0787-01A 69 years, male, asian 17.5
TCGA-14-0871-01A 75 years, female, white 14.0
TCGA-06-0130-01A 54 years, male, white 5.9
TCGA-06-2569-01A 24 years, female, black or african american 4.9
TCGA-28-5218-01A 63 years, male, white 3.7
Show all

GLIOMA - Protein expression

 

Antibody HPA003282

Antibody CAB020828

 Antibody staining
  High
  Medium
  Low
  Not detected
   
 Intensity
  Strong
  Moderate
  Weak
  Negative
   
 Quantity
  >75%
  75%-25%
  <25%
  Rare
  Negative
   
 Location
  Cytoplasmic/membranous,nuclear
  Cytoplasmic/membranous
  Nuclear
  None
   

Click images for details











































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