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ACSS3

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:1.1TPM
GTEx:1.7RPKM
FANTOM5:10.1Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Glandular cells:Not detected
Endothelial cells:Not detected
 

Antibody staining

Antibody HPA039353

  

Antibody HPA047956

  

Glandular cells

 Medium   Not detected  

Endothelial cells

 Not detected  
   
   
   

COLON - HPA RNA-seq

Average TPM

1.1
overview Male, age 54 Sample 1
TPM: 0.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 0.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 0.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 1.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 1.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 1
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 1.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 0.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 0.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 2.6
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 1.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

1.7

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 2.1
Samples: 149

Max RPKM: 8.9
Min RPKM: 0.5
Std RPKM: 1.1
Median RPKM: 1.8
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 8.9
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 4.8
GTEX-145LS-2926-SM-5O99G 60-69 years, female 4.6
GTEX-12ZZY-2726-SM-5EQ45 60-69 years, male 4.4
GTEX-ZAB4-2426-SM-5HL8A 40-49 years, male 4.4
GTEX-YJ8O-1426-SM-5PNV9 40-49 years, female 4.3
GTEX-117XS-2226-SM-5GIE1 60-69 years, male 4.2
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 4.1
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 3.9
GTEX-14A5I-2426-SM-5Q5CP 50-59 years, female 3.9
Show all
Colon - Transverse
RPKM: 1.4
Samples: 196

Max RPKM: 7.1
Min RPKM: 0.1
Std RPKM: 1.3
Median RPKM: 0.9
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 7.1
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 6.6
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 6.2
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 5.7
GTEX-14BMV-2426-SM-5S2PP 50-59 years, male 5.4
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 5.2
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 5.2
GTEX-13O3P-2326-SM-5KM55 50-59 years, male 4.4
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 4.2
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 4.2
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

10.1

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 10.1
FF:10014-101C5 62,83,84 years, mixed 10.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.