We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • HUMAN PATHOLOGY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
SERINC1
  • TISSUE

  • CELL

  • PATHOLOGY

TISSUE ATLAS PRIMARY DATA HIPPOCAMPUS

GENE/PROTEIN

Antibody validation


Dictionary

Hippocampus

HIPPOCAMPUS - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:170.2RPKM
FANTOM5:480.6Tags Per Million

HIPPOCAMPUS - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Low
 

Antibody staining

Antibody HPA035738

 

Antibody HPA035739

 

Glial cells

Low   Not detected  

Neuronal cells

High   Low  
   
   
   

HIPPOCAMPUS - HPA RNA-seq

Pending HPA RNA-seq analysis


HIPPOCAMPUS - GTEx RNA-seq

Average RPKM

170.2

GTEx sample id

Sample description

RPKM

Brain - Hippocampus
RPKM: 170.2
Samples: 94

Max RPKM: 439.6
Min RPKM: 46.6
Std RPKM: 65.1
Median RPKM: 168.2
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 439.6
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 328.6
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 300.9
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 267.7
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 265.3
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 264.9
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 257.9
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 257.7
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 252.7
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 252.4
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 251.5
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 250.5
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 247.3
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 238.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 236.6
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 233.9
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 229.1
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 222.6
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 217.2
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 216.2
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 215.2
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 212.7
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 212.0
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 205.9
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 204.4
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 202.2
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 200.4
GTEX-RNOR-0011-R1A-SM-5SI8F 50-59 years, female 199.3
GTEX-13OW6-0011-R1a-SM-5L3HQ 50-59 years, male 195.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 195.0
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 194.4
GTEX-ZUA1-0011-R1a-SM-4YCE2 40-49 years, male 192.8
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 191.9
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 189.2
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 188.7
GTEX-145LS-0011-R1b-SM-5PNUP 60-69 years, female 188.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 186.0
GTEX-N7MT-0011-R1a-SM-5SI7S 60-69 years, female 185.2
GTEX-XOTO-0011-R1B-SM-4B65C 50-59 years, male 183.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 179.7
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 177.8
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 177.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 175.8
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 171.4
GTEX-14ASI-0011-R1b-SM-5S2TY 60-69 years, male 170.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 169.5
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 169.4
GTEX-13N2G-0011-R1b-SM-5MR3G 60-69 years, male 167.0
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 166.9
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 166.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 165.3
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 159.6
GTEX-11GSO-0011-R1b-SM-57WD3 60-69 years, male 157.4
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 155.5
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 155.2
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 147.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 145.6
GTEX-NPJ7-0011-R1a-SM-3GACT 60-69 years, female 145.1
GTEX-12WSB-0011-R1b-SM-5P9EY 60-69 years, female 144.7
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 144.0
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 140.0
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 139.2
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 138.5
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 135.8
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 134.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 132.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 131.0
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 130.3
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 129.4
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 126.9
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 126.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 125.8
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 123.9
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 121.4
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 121.1
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 118.1
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 117.1
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 115.6
GTEX-YJ89-0011-R1a-SM-4RGLS 60-69 years, male 113.4
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 112.5
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 111.8
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 101.2
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 101.1
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 93.8
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 87.5
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 87.0
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 72.0
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 71.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 65.7
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 64.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 61.7
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 58.9
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 57.7
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 46.6
Show all

HIPPOCAMPUS - FANTOM5 CAGE

Average Tags Per Million

480.6

FANTOM5 sample id

Sample description

Tags Per Million

Hippocampus
Tags Per Million: 582.4
FF:10169-103B7 60 years, female 583.8
FF:10153-102I9 76 years, female 581.0

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.