Tissue expression of NCOA7 - Staining in skin - The Human Protein Atlas

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NCOA7

TISSUE

CELL

PATHOLOGY

TISSUE ATLAS PRIMARY DATA SKIN

GENE/PROTEIN

Antibody validation

Dictionary
	Skin
	Anal skin


Tissue proteome
	Skin
	Extended skin samples

SKIN - Expression summary

Protein expression

h

m

l

n

RNA expression

HPA:	13.5	TPM
GTEx:	4.4	RPKM

SKIN 1 - Annotated protein expression

Annotated protein
expression

Fibroblasts:	Low
Keratinocytes:	Medium
Langerhans:	Low
Melanocytes:	Not detected

Antibody staining	Antibody HPA030289		Antibody HPA030290		Antibody HPA030291		Antibody HPA030292
Fibroblasts	Medium		Not detected		Not detected		Medium
Keratinocytes	Low		Medium		Medium		High
Langerhans	Low		Low		Not detected		Medium
Melanocytes	Not detected		Not detected		Not detected		Low

SKIN 2 - Annotated protein expression

Annotated protein
expression

Epidermal cells:	Medium

Antibody staining	Antibody HPA030289		Antibody HPA030290		Antibody HPA030291		Antibody HPA030292
Epidermal cells	Not detected		Medium		Medium		High

SKIN - HPA RNA-seq

Average TPM	13.5

overview

Female, age 34

Sample 1
TPM: 15.2

Cell types%

Keratinocytes: 60
Other cell types: 40

overview

Female, age 30

Sample 2
TPM: 15.1

Cell types%

Keratinocytes: 55
Other cell types: 45

N/A

Male, age 57

Sample 3
TPM: 10.4

SKIN - GTEx RNA-seq

Average RPKM	4.4

GTEx sample id

Sample description

RPKM

Skin - Not Sun Exposed (Suprapubic)
RPKM: 4.8

Samples: 250

Max RPKM: 28.2
Min RPKM: 1.2
Std RPKM: 3.4
Median RPKM: 3.9

GTEX-14A5H-0826-SM-5QGPJ

60-69 years, male

28.2

GTEX-ZYFD-0626-SM-5E44E

50-59 years, male

23.1

GTEX-14E6C-2426-SM-5S2NF

40-49 years, male

19.9

GTEX-U8XE-0226-SM-4E3J3

30-39 years, male

17.0

GTEX-13JUV-2026-SM-5K7UA

40-49 years, female

16.8

GTEX-14C38-0726-SM-5SI6M

50-59 years, male

15.9

GTEX-X8HC-0626-SM-4E3HQ

50-59 years, female

14.9

GTEX-ZAJG-1526-SM-5CVML

50-59 years, female

14.5

GTEX-ZVE2-2826-SM-5GU51

50-59 years, male

14.1

GTEX-WYBS-0626-SM-3NMAS

60-69 years, female

13.4

Show all

Skin - Sun Exposed (Lower leg)
RPKM: 4.2

Samples: 357

Max RPKM: 29.8
Min RPKM: 1.1
Std RPKM: 2.7
Median RPKM: 3.5

GTEX-WOFL-0126-SM-3MJG2

60-69 years, male

29.8

GTEX-13NYC-0326-SM-5K7WP

60-69 years, male

24.9

GTEX-U8XE-0326-SM-3DB8P

30-39 years, male

15.5

GTEX-11O72-0126-SM-59887

40-49 years, male

15.0

GTEX-11WQK-0526-SM-5EQLD

50-59 years, male

14.4

GTEX-14E6E-1826-SM-5S2R7

30-39 years, male

13.8

GTEX-P4QR-0326-SM-5SI8P

60-69 years, male

11.6

GTEX-ZYFD-0126-SM-5GIDL

50-59 years, male

11.5

GTEX-1192W-2626-SM-5Q5AF

60-69 years, male

11.0

GTEX-ZZPT-0226-SM-5E43X

50-59 years, male

11.0

Show all

SKIN - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.