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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:8.6TPM
GTEx:7.0RPKM
FANTOM5:10.5Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Chondrocytes:Medium
Fibroblasts:Low
Peripheral nerve:Not available
 

Antibody staining

Antibody HPA031217

  

Antibody HPA031219

  

Adipocytes

 Low   Medium  

Chondrocytes

 Medium  

Fibroblasts

 Low   Medium  

Peripheral nerve

 Medium  
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Medium
Peripheral nerve:Low
 

Antibody staining

Antibody HPA031217

  

Antibody HPA031219

  

Adipocytes

 Low   Not detected  

Fibroblasts

 Medium   High  

Peripheral nerve

 Low   Not detected  
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

8.6
N/A Female, age 80 Sample 1
TPM: 5.1
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 2.4
N/A Female, age 57 Sample 3
TPM: 1.1
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 15.5
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 18.7
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

7.0

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 6.2
Samples: 350

Max RPKM: 18.9
Min RPKM: 2.3
Std RPKM: 2.7
Median RPKM: 5.4
GTEX-T5JW-1726-SM-3GADN 20-29 years, female 18.9
GTEX-QESD-1526-SM-2S1QT 20-29 years, male 18.8
GTEX-ZYVF-0226-SM-5GIEG 50-59 years, female 16.1
GTEX-QEG5-0326-SM-2S1PB 20-29 years, male 16.0
GTEX-XXEK-2426-SM-4BRUS 50-59 years, male 15.7
GTEX-U8XE-0426-SM-3DB91 30-39 years, male 15.6
GTEX-X4XY-0326-SM-46MVZ 60-69 years, male 15.2
GTEX-144GM-1926-SM-5LUAN 20-29 years, male 15.0
GTEX-REY6-0326-SM-2TF5A 60-69 years, male 14.1
GTEX-13O1R-0226-SM-5K7U5 60-69 years, male 13.8
Show all
Adipose - Visceral (Omentum)
RPKM: 8.4
Samples: 227

Max RPKM: 25.9
Min RPKM: 3.0
Std RPKM: 4.5
Median RPKM: 6.7
GTEX-13QBU-1326-SM-5LU4K 40-49 years, female 25.9
GTEX-133LE-0926-SM-5P9J1 20-29 years, female 24.4
GTEX-Y5LM-0826-SM-4VDSW 40-49 years, female 23.2
GTEX-ZTSS-1026-SM-5985N 40-49 years, male 22.0
GTEX-11WQK-1526-SM-5EGKN 50-59 years, male 21.0
GTEX-Y114-1326-SM-4TT9A 50-59 years, female 20.3
GTEX-ZLV1-0926-SM-5S2MR 60-69 years, female 20.2
GTEX-XBEW-1726-SM-4RGMA 40-49 years, male 20.1
GTEX-ZA64-0926-SM-5HL7H 20-29 years, male 19.5
GTEX-11I78-0226-SM-5HL6R 50-59 years, female 18.4
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

10.5

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 10.5
FF:10010-101C1 65,65,76 years, mixed 10.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.