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SEC24A

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:12.0TPM
GTEx:4.5RPKM
FANTOM5:117.9Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Low
 

Antibody staining

Antibody HPA038901

  

Endothelial cells

 Low  

Glandular cells

 Low  
 
 

COLON - HPA RNA-seq

Average TPM

12.0
overview Male, age 54 Sample 1
TPM: 20.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 11.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 11.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 10.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 8.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 8.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 9.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 12.9
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 13.3
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 13.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 15
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 10.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 9
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

4.5

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 3.8
Samples: 149

Max RPKM: 8.8
Min RPKM: 2.2
Std RPKM: 0.9
Median RPKM: 3.7
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 8.8
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 7.0
GTEX-14C39-1626-SM-5S2P4 40-49 years, male 6.5
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 6.5
GTEX-14C5O-2626-SM-5RQI5 60-69 years, male 6.4
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 5.9
GTEX-14E6E-1726-SM-5S2R6 30-39 years, male 5.8
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 5.8
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 5.6
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 5.5
Show all
Colon - Transverse
RPKM: 4.9
Samples: 196

Max RPKM: 11.6
Min RPKM: 2.5
Std RPKM: 1.4
Median RPKM: 4.7
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 11.6
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 9.6
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 9.1
GTEX-144GM-1226-SM-5LU52 20-29 years, male 8.8
GTEX-144GN-1126-SM-5LU33 50-59 years, male 8.5
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 8.5
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 8.3
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 8.3
GTEX-11P82-1026-SM-5BC5J 20-29 years, male 8.1
GTEX-U4B1-1126-SM-4DXV3 40-49 years, male 8.1
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

117.9

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 117.9
FF:10014-101C5 62,83,84 years, mixed 117.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.