Tissue expression of PDCL3 - Staining in adipose tissue

SOFT TISSUE - Expression summary

Protein expression

RNA expression

HPA:	18.0	TPM
GTEx:	7.5	RPKM
FANTOM5:	15.5	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Medium
Chondrocytes:	High
Fibroblasts:	High
Peripheral nerve:	Not detected

Antibody staining	Antibody HPA018469	Antibody HPA027094
Adipocytes	Medium	Not detected
Chondrocytes	High
Fibroblasts	High	Not detected
Peripheral nerve	Not detected	Not detected

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Medium
Fibroblasts:	High

Antibody staining	Antibody HPA018469	Antibody HPA027094
Adipocytes	Medium	Not detected
Fibroblasts	High	Not detected

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	18.0

Female, age 80

Sample 1
TPM: 16.1

Cell types%

Adipocytes: 95
Other cell types: 5

Female, age 45

Sample 2
TPM: 13.4

Female, age 57

Sample 3
TPM: 11.1

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

Female, age 74

Sample 4
TPM: 30.5

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

Female, age 59

Sample 5
TPM: 18.7

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	7.5

GTEx sample id

Sample description

RPKM

Adipose - Subcutaneous
RPKM: 7.5

Samples: 350

Max RPKM: 14.0
Min RPKM: 4.0
Std RPKM: 1.5
Median RPKM: 7.4

GTEX-ZE7O-0226-SM-5S2N1

50-59 years, female

14.0

GTEX-Y5V6-2526-SM-5IFJV

60-69 years, male

12.6

GTEX-13NYS-0226-SM-5MR49

60-69 years, male

11.9

GTEX-POMQ-2326-SM-5S2VS

20-29 years, female

11.9

GTEX-POYW-0726-SM-2XCEO

60-69 years, male

11.8

GTEX-139YR-2426-SM-5J1OB

50-59 years, male

11.6

GTEX-13OW6-0526-SM-5L3HY

50-59 years, male

11.4

GTEX-13W3W-2526-SM-5SI9P

60-69 years, female

11.4

GTEX-XMD2-0226-SM-4WWEE

60-69 years, female

11.3

GTEX-ZYVF-0226-SM-5GIEG

50-59 years, female

10.9

Show all

Adipose - Visceral (Omentum)
RPKM: 7.3

Samples: 227

Max RPKM: 13.2
Min RPKM: 4.4
Std RPKM: 1.5
Median RPKM: 7.1

GTEX-132QS-0826-SM-5K7WV

60-69 years, male

13.2

GTEX-1192X-1526-SM-5H11I

50-59 years, male

11.9

GTEX-12WSI-1526-SM-5GCNM

50-59 years, male

11.8

GTEX-13X6H-1726-SM-5Q5EH

50-59 years, female

11.6

GTEX-11DXX-2026-SM-5EGJL

60-69 years, female

11.3

GTEX-X585-2526-SM-4QAS1

50-59 years, male

10.9

GTEX-ZE7O-1526-SM-5J1NH

50-59 years, female

10.8

GTEX-Y5LM-0826-SM-4VDSW

40-49 years, female

10.7

GTEX-131XE-2026-SM-5LZW1

50-59 years, male

10.5

GTEX-145MI-0826-SM-5SI95

60-69 years, female

10.5

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	15.5

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 15.5

FF:10010-101C1

65,65,76 years, mixed

15.5