Tissue expression of ODC1 - Staining in adipose tissue

SOFT TISSUE - Expression summary

Protein expression

RNA expression

HPA:	56.4	TPM
GTEx:	20.0	RPKM
FANTOM5:	14.4	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Low
Fibroblasts:	Low
Peripheral nerve:	Low
Chondrocytes:	Low

Antibody staining	Antibody HPA001536	Antibody CAB035996
Adipocytes	High	Low
Fibroblasts	Medium	Low
Peripheral nerve	Not detected	Low
Chondrocytes	Low

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Low
Fibroblasts:	Medium
Peripheral nerve:	Not detected
Chondrocytes:	Not detected

Antibody staining	Antibody HPA001536	Antibody CAB035996
Adipocytes	Not detected	Low
Fibroblasts	High	Medium
Peripheral nerve	Low	Not detected
Chondrocytes	Not detected

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	56.4

Female, age 80

Sample 1
TPM: 32.9

Cell types%

Adipocytes: 95
Other cell types: 5

Female, age 45

Sample 2
TPM: 26.2

Female, age 57

Sample 3
TPM: 28.3

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

Female, age 74

Sample 4
TPM: 127.6

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

Female, age 59

Sample 5
TPM: 67

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	20.0

GTEx sample id

Sample description

RPKM

Adipose - Subcutaneous
RPKM: 17.0

Samples: 350

Max RPKM: 51.8
Min RPKM: 6.1
Std RPKM: 7.5
Median RPKM: 15.3

GTEX-11H98-0226-SM-5NQ89

50-59 years, male

51.8

GTEX-POYW-0726-SM-2XCEO

60-69 years, male

51.2

GTEX-OXRL-0226-SM-3NB18

50-59 years, male

48.2

GTEX-11P82-1726-SM-5Q5AT

20-29 years, male

47.4

GTEX-S95S-1326-SM-2XCDK

60-69 years, male

47.3

GTEX-ZYVF-0226-SM-5GIEG

50-59 years, female

45.1

GTEX-12C56-1626-SM-5FQUO

20-29 years, male

44.2

GTEX-XYKS-2726-SM-4E3IC

60-69 years, female

43.3

GTEX-REY6-0326-SM-2TF5A

60-69 years, male

39.3

GTEX-QV31-1326-SM-2S1QE

30-39 years, male

37.6

Show all

Adipose - Visceral (Omentum)
RPKM: 24.7

Samples: 227

Max RPKM: 69.5
Min RPKM: 7.5
Std RPKM: 11.2
Median RPKM: 22.7

GTEX-13X6H-1726-SM-5Q5EH

50-59 years, female

69.5

GTEX-13QBU-1326-SM-5LU4K

40-49 years, female

66.6

GTEX-133LE-0926-SM-5P9J1

20-29 years, female

64.2

GTEX-11EM3-1126-SM-5A5KM

20-29 years, female

63.9

GTEX-Y114-1326-SM-4TT9A

50-59 years, female

58.8

GTEX-11P82-0326-SM-5HL51

20-29 years, male

58.3

GTEX-13RTK-0726-SM-5Q5EN

20-29 years, male

54.9

GTEX-14B4R-0526-SM-5QGQT

30-39 years, male

54.8

GTEX-XBEW-1726-SM-4RGMA

40-49 years, male

51.3

GTEX-ZTX8-0726-SM-59HL9

20-29 years, male

50.5

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	14.4

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 14.4

FF:10010-101C1

65,65,76 years, mixed

14.4