Tissue expression of MSH6 - Staining in adipose tissue

SOFT TISSUE - Expression summary

Protein expression

RNA expression

HPA:	14.3	TPM
GTEx:	4.8	RPKM
FANTOM5:	33.9	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Low
Fibroblasts:	Not detected
Peripheral nerve:	Not detected
Chondrocytes:	Medium

Antibody staining	Antibody HPA028376	Antibody HPA028446	Antibody CAB009091
Adipocytes	Not detected	Not detected	Medium
Fibroblasts	Not detected	Not detected	Not detected
Peripheral nerve	Not detected	Not detected
Chondrocytes	Medium

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Medium
Fibroblasts:	Not detected
Peripheral nerve:	Not detected

Antibody staining	Antibody HPA028376	Antibody HPA028446	Antibody CAB009091
Adipocytes	Not detected	Not detected	Medium
Fibroblasts	Not detected	Not detected	Not detected
Peripheral nerve	Not detected	Not detected	Not detected

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	14.3

Female, age 80

Sample 1
TPM: 14.8

Cell types%

Adipocytes: 95
Other cell types: 5

Female, age 45

Sample 2
TPM: 10.2

Female, age 57

Sample 3
TPM: 8

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

Female, age 74

Sample 4
TPM: 22.4

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

Female, age 59

Sample 5
TPM: 16

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	4.8

GTEx sample id

Sample description

RPKM

Adipose - Subcutaneous
RPKM: 5.0

Samples: 350

Max RPKM: 7.9
Min RPKM: 2.9
Std RPKM: 0.9
Median RPKM: 4.9

GTEX-12WSA-0326-SM-5BC6I

60-69 years, male

7.9

GTEX-139T8-0226-SM-5L3EA

60-69 years, male

7.9

GTEX-P4QR-0426-SM-2S1NV

60-69 years, male

7.8

GTEX-RVPU-2326-SM-2TF6R

50-59 years, male

7.7

GTEX-QESD-1526-SM-2S1QT

20-29 years, male

7.4

GTEX-POYW-0726-SM-2XCEO

60-69 years, male

7.2

GTEX-UTHO-0426-SM-5SI7N

60-69 years, male

7.2

GTEX-139D8-0326-SM-5IJCJ

30-39 years, female

7.1

GTEX-148VI-1726-SM-5S2W9

60-69 years, female

7.0

GTEX-P4QT-0226-SM-3LK68

50-59 years, female

7.0

Show all

Adipose - Visceral (Omentum)
RPKM: 4.4

Samples: 227

Max RPKM: 7.8
Min RPKM: 2.3
Std RPKM: 1.0
Median RPKM: 4.3

GTEX-13S86-0926-SM-5SI6I

40-49 years, male

7.8

GTEX-13U4I-1726-SM-5J1MF

40-49 years, female

7.7

GTEX-XV7Q-1726-SM-4BRUU

40-49 years, female

7.0

GTEX-13W46-1226-SM-5SIAS

50-59 years, male

6.9

GTEX-13JUV-0626-SM-5J1MQ

40-49 years, female

6.8

GTEX-WYVS-0626-SM-4SOJY

40-49 years, female

6.8

GTEX-Y8E4-1226-SM-5IFIM

40-49 years, male

6.8

GTEX-14E1K-0426-SM-5S2PF

50-59 years, male

6.6

GTEX-UPK5-1826-SM-3GAEB

40-49 years, male

6.6

GTEX-ZGAY-1326-SM-5S2NS

40-49 years, female

6.5

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	33.9

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 33.9

FF:10010-101C1

65,65,76 years, mixed

33.9