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Cancer

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MSH6
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    CELL

  • PATHOLOGY

TISSUE ATLAS PRIMARY DATA CEREBELLUM

GENE/PROTEIN

Antibody validation


Dictionary

Cerebellum

CEREBELLUM - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:6.4RPKM
FANTOM5:69.6Tags Per Million

CEREBELLUM - Annotated protein expression

Annotated protein
expression

Cells in granular layer:Medium
Cells in molecular layer:Low
Purkinje cells:Medium
 

Antibody staining

Antibody HPA028376

 

Antibody HPA028446

 

Antibody CAB009091

 

Cells in granular layer

Not detected   Medium   Not detected  

Cells in molecular layer

Low   Low   Not detected  

Purkinje cells

Medium   Low   Medium  
     
     
     

CEREBELLUM - HPA RNA-seq

Pending HPA RNA-seq analysis


CEREBELLUM - GTEx RNA-seq

Average RPKM

6.4

GTEx sample id

Sample description

RPKM

Brain - Cerebellar Hemisphere
RPKM: 6.6
Samples: 105

Max RPKM: 10.5
Min RPKM: 2.4
Std RPKM: 1.4
Median RPKM: 6.5
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 10.5
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 10.5
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 9.9
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 9.9
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 9.7
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 9.5
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 9.3
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 9.2
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 8.5
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 8.2
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 8.2
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 8.1
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 8.0
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 7.9
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 7.9
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 7.9
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 7.9
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 7.7
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 7.7
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 7.7
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 7.6
GTEX-XOTO-0011-R11B-SM-4B64O 50-59 years, male 7.6
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 7.4
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 7.3
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 7.3
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 7.3
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 7.2
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 7.2
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 7.2
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 7.1
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 7.1
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 7.1
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 7.1
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 7.1
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 7.0
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 7.0
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 7.0
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 7.0
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 6.9
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 6.9
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 6.9
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 6.9
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 6.9
GTEX-RU72-0011-R11A-SM-5SI8G 50-59 years, female 6.8
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 6.7
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 6.7
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 6.6
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 6.6
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 6.6
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 6.6
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 6.6
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 6.5
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 6.5
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 6.5
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 6.5
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 6.5
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 6.5
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 6.4
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 6.4
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 6.3
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 6.3
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 6.3
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 6.3
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 6.2
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 6.2
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 6.2
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 6.2
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 6.2
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 6.2
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 6.1
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 6.1
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 6.0
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 6.0
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 6.0
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 6.0
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 5.9
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 5.9
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 5.9
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 5.8
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 5.8
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 5.8
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 5.7
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 5.7
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 5.6
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 5.6
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 5.6
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 5.5
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 5.5
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 5.5
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 5.4
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 5.2
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 5.1
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 5.0
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 4.9
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 4.9
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 4.7
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 4.7
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 4.6
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 4.5
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 4.2
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 4.0
GTEX-12WSB-0011-R11b-SM-57WBJ 60-69 years, female 3.7
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 2.8
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 2.4
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 2.4
Show all
Brain - Cerebellum
RPKM: 6.2
Samples: 125

Max RPKM: 11.4
Min RPKM: 2.2
Std RPKM: 1.1
Median RPKM: 6.2
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 11.4
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 9.7
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 8.7
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 8.6
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 8.3
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 8.2
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 8.2
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 8.2
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 8.0
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 7.9
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 7.7
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 7.3
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 7.2
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 7.2
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 7.2
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 7.2
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 7.1
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 7.1
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 7.1
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 7.0
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 7.0
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 7.0
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 7.0
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 6.9
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 6.9
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 6.9
GTEX-12126-0926-SM-5FQTW 20-29 years, male 6.8
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 6.8
GTEX-N7MT-1226-SM-2D7W4 60-69 years, female 6.8
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 6.8
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 6.7
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 6.7
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 6.7
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 6.7
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 6.7
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 6.7
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 6.6
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 6.6
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 6.6
GTEX-145LS-3026-SM-5O99S 60-69 years, female 6.6
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 6.6
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 6.6
GTEX-RU72-2926-SM-2TF66 50-59 years, female 6.6
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 6.6
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 6.5
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 6.5
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 6.4
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 6.4
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 6.4
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 6.4
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 6.4
GTEX-1192X-3226-SM-5987D 50-59 years, male 6.3
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 6.3
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 6.3
GTEX-13112-2926-SM-5DUWT 50-59 years, male 6.3
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 6.3
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 6.3
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 6.3
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 6.3
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 6.3
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 6.3
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 6.2
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 6.2
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 6.2
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 6.2
GTEX-11NUK-3026-SM-5986K 50-59 years, male 6.1
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 6.1
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 6.1
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 6.1
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 6.1
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 6.1
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 6.0
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 6.0
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 6.0
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 6.0
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 6.0
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 6.0
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 6.0
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 5.9
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 5.9
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 5.9
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 5.8
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 5.8
GTEX-WL46-2826-SM-3LK81 50-59 years, male 5.8
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 5.7
GTEX-11DYG-2926-SM-5H132 60-69 years, male 5.7
GTEX-12WSB-3026-SM-59HKM 60-69 years, female 5.7
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 5.7
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 5.7
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 5.7
GTEX-11ONC-3026-SM-5985W 60-69 years, male 5.6
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 5.6
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 5.6
GTEX-144GL-2926-SM-5O99F 50-59 years, male 5.6
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 5.6
GTEX-XOTO-2926-SM-4B65G 50-59 years, male 5.6
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 5.5
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 5.5
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 5.5
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 5.5
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 5.5
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 5.4
GTEX-R55F-1226-SM-2TF59 50-59 years, male 5.4
GTEX-X261-3126-SM-4PQZC 50-59 years, male 5.4
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 5.4
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 5.3
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 5.3
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 5.2
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 5.2
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 5.2
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 5.2
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 5.1
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 5.0
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 5.0
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 5.0
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 5.0
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 5.0
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 4.9
GTEX-11EI6-2926-SM-5985U 60-69 years, male 4.7
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 4.7
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 4.5
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 4.4
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 4.2
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 3.6
GTEX-11OF3-3126-SM-5GU5E 60-69 years, male 2.2
Show all

CEREBELLUM - FANTOM5 CAGE

Average Tags Per Million

69.6

FANTOM5 sample id

Sample description

Tags Per Million

Cerebellum
Tags Per Million: 69.6
FF:10166-103B4 76 years, female 101.6
FF:10083-102B2 22-68 years, mixed 37.5

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