Tissue expression of MSH6 - Staining in esophagus

ESOPHAGUS - Expression summary

Protein expression

RNA expression

HPA:	15.2	TPM
GTEx:	4.0	RPKM
FANTOM5:	32.3	Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:

Medium

Antibody staining	Antibody HPA028376	Antibody HPA028446	Antibody CAB009091
Squamous epithelial cells	Medium	Medium	High

ESOPHAGUS - HPA RNA-seq

Average TPM	15.2

Female, age 70

Sample 1
TPM: 14.7

Cell types%

Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45

Male, age 38

Sample 2
TPM: 15

Cell types%

Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20

Male, age 76

Sample 3
TPM: 15.8

Cell types%

Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM	4.0

GTEx sample id

Sample description

RPKM

Esophagus - Mucosa
RPKM: 4.0

Samples: 286

Max RPKM: 9.9
Min RPKM: 0.9
Std RPKM: 1.4
Median RPKM: 3.9

GTEX-RUSQ-0826-SM-47JWW

50-59 years, male

9.9

GTEX-133LE-0626-SM-5IFFJ

20-29 years, female

9.6

GTEX-RU72-0726-SM-46MUW

50-59 years, female

8.3

GTEX-TMMY-1126-SM-4DXSX

40-49 years, female

8.0

GTEX-ZT9X-0526-SM-5GCOP

40-49 years, male

8.0

GTEX-12WSL-1526-SM-5GCP8

50-59 years, male

7.9

GTEX-146FH-1726-SM-5QGQ2

50-59 years, female

7.4

GTEX-146FQ-1026-SM-5LU8I

30-39 years, male

7.4

GTEX-Y8E4-1726-SM-5LU9G

40-49 years, male

7.3

GTEX-ZYWO-1026-SM-5E45U

40-49 years, female

7.3

Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million	32.3

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 32.3

FF:10015-101C6

68,74,75 years, mixed

32.3