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MSH6

LIVER - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:10.6TPM
GTEx:2.9RPKM
FANTOM5:32.0Tags Per Million

LIVER - Annotated protein expression

Annotated protein
expression

Bile duct cells:Low
Hepatocytes:Medium
 

Antibody staining

Antibody HPA028376

  

Antibody HPA028446

  

Antibody CAB009091

  

Bile duct cells

 Not detected   Low   Low  

Hepatocytes

 Low   Low   Low  
     
     
     

LIVER - HPA RNA-seq

Average TPM

10.6
N/A Female, age 60 Sample 1
TPM: 11
overview Male, age 54 Sample 2
TPM: 12.5
Cell types%
Hepatocytes: 80
Fibroblasts: 15
Other cell types: 5
overview Male, age 74 Sample 3
TPM: 10.7
Cell types%
Hepatocytes: 85
Fibroblasts: 5
Other cell types: 10
overview Female, age 62 Sample 4
TPM: 10.6
Cell types%
Hepatocytes: 70
Fibroblasts: 10
Other cell types: 20
overview Male, age 78 Sample 5
TPM: 5.7
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Male, age 53 Sample 6
TPM: 12.4
Cell types%
Hepatocytes: 80
Fibroblasts: 5
Other cell types: 15
overview Male, age 77 Sample 7
TPM: 9.6
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Female, age 72 Sample 8
TPM: 5.9
Cell types%
Hepatocytes: 50
Fibroblasts: 10
Other cell types: 40
overview Male, age 70 Sample 9
TPM: 10
Cell types%
Hepatocytes: 65
Fibroblasts: 10
Other cell types: 25
overview Female, age 23 Sample 10
TPM: 17.4
Cell types%
Hepatocytes: 70
Fibroblasts: 5
Other cell types: 25

LIVER - GTEx RNA-seq

Average RPKM

2.9

GTEx sample id

Sample description

RPKM
Liver
RPKM: 2.9
Samples: 119

Max RPKM: 5.8
Min RPKM: 0.9
Std RPKM: 0.8
Median RPKM: 2.7
GTEX-Y5LM-0426-SM-4VBRO 40-49 years, female 5.8
GTEX-UPIC-0926-SM-4IHLV 20-29 years, female 5.3
GTEX-13N11-0926-SM-5IJG2 50-59 years, female 5.0
GTEX-146FH-1526-SM-5NQBU 50-59 years, female 5.0
GTEX-ZPU1-0826-SM-57WG2 40-49 years, male 5.0
GTEX-R53T-0326-SM-48FEC 50-59 years, female 4.7
GTEX-YB5E-0326-SM-5IFHU 40-49 years, male 4.2
GTEX-14AS3-0126-SM-5Q5F4 40-49 years, female 4.1
GTEX-12WSL-0226-SM-5CVMJ 50-59 years, male 4.0
GTEX-131XE-0326-SM-5LZVO 50-59 years, male 4.0
Show all

LIVER - FANTOM5 CAGE

Average Tags Per Million

32.0

FANTOM5 sample id

Sample description

Tags Per Million
Liver
Tags Per Million: 32.0
FF:10018-101C9 64,69,70 years, mixed 32.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.