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ESOPHAGUS - Expression summary

RNA expression
HPA:5.7TPM
GTEx:2.6RPKM
FANTOM5:20.8Tags Per Million

ESOPHAGUS - Annotated protein expression
 

Antibody staining

Antibody HPA007421

  

Antibody HPA008061

  

Squamous epithelial cells

 Low   Not detected  
   
   
   

ESOPHAGUS - HPA RNA-seq

Average TPM

5.7
overview Female, age 70 Sample 1
TPM: 4.2
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38 Sample 2
TPM: 6.3
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76 Sample 3
TPM: 6.4
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

2.6

GTEx sample id

Sample description

RPKM
Esophagus - Mucosa
RPKM: 2.6
Samples: 286

Max RPKM: 4.5
Min RPKM: 1.0
Std RPKM: 0.5
Median RPKM: 2.5
GTEX-13O1R-1326-SM-5IJF5 60-69 years, male 4.5
GTEX-R3RS-1326-SM-48FE7 40-49 years, female 4.3
GTEX-XLM4-2326-SM-4TT2D 60-69 years, male 4.1
GTEX-Y111-1626-SM-57WCY 50-59 years, male 4.1
GTEX-12KS4-0926-SM-5BC5S 30-39 years, male 3.9
GTEX-13X6I-1026-SM-5LU4C 60-69 years, male 3.9
GTEX-ZYT6-1126-SM-5GZYR 30-39 years, male 3.9
GTEX-144FL-2726-SM-5O98Z 50-59 years, male 3.8
GTEX-11DYG-1326-SM-5N9DO 60-69 years, male 3.7
GTEX-139TU-1226-SM-5J2NL 60-69 years, male 3.7
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

20.8

FANTOM5 sample id

Sample description

Tags Per Million
Esophagus
Tags Per Million: 20.8
FF:10015-101C6 68,74,75 years, mixed 20.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.