Tissue expression of HDAC1 - Staining in adipose tissue

SOFT TISSUE - Expression summary

Protein expression

RNA expression

HPA:	32.9	TPM
GTEx:	22.2	RPKM
FANTOM5:	18.7	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Chondrocytes:	Medium
Fibroblasts:	Medium
Adipocytes:	Low

Antibody staining	Antibody HPA029693	Antibody CAB005017	Antibody CAB068191
Chondrocytes	Medium	Medium
Fibroblasts	Medium	Medium	Medium
Adipocytes	High

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Low
Fibroblasts:	Low
Peripheral nerve:	Not detected

Antibody staining	Antibody HPA029693	Antibody CAB005017	Antibody CAB068191
Adipocytes	Not detected	Medium	Not detected
Fibroblasts	Medium	Medium	Not detected
Peripheral nerve	Not detected	Not detected

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	32.9

Female, age 80

Sample 1
TPM: 41.8

Cell types%

Adipocytes: 95
Other cell types: 5

Female, age 45

Sample 2
TPM: 21.4

Female, age 57

Sample 3
TPM: 23.4

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

Female, age 74

Sample 4
TPM: 49.8

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

Female, age 59

Sample 5
TPM: 28.2

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	22.2

GTEx sample id

Sample description

RPKM

Adipose - Subcutaneous
RPKM: 20.7

Samples: 350

Max RPKM: 36.1
Min RPKM: 8.3
Std RPKM: 4.2
Median RPKM: 20.6

GTEX-POMQ-2326-SM-5S2VS

20-29 years, female

36.1

GTEX-11DZ1-0226-SM-5A5KF

50-59 years, male

34.7

GTEX-NPJ8-0226-SM-48TBN

40-49 years, male

33.3

GTEX-11WQC-2426-SM-5EQKQ

60-69 years, male

31.6

GTEX-W5X1-2626-SM-4LMI8

40-49 years, female

31.2

GTEX-ZE9C-2826-SM-5S2MO

60-69 years, male

30.6

GTEX-QEL4-0326-SM-3GAE5

50-59 years, male

30.5

GTEX-13NZ8-0926-SM-5MR3U

60-69 years, female

30.3

GTEX-11O72-0226-SM-59869

40-49 years, male

30.2

GTEX-QV44-1825-SM-447CF

50-59 years, male

29.8

Show all

Adipose - Visceral (Omentum)
RPKM: 24.4

Samples: 227

Max RPKM: 48.5
Min RPKM: 12.0
Std RPKM: 6.0
Median RPKM: 23.6

GTEX-14A6H-1026-SM-5SIAZ

30-39 years, male

48.5

GTEX-UPK5-1826-SM-3GAEB

40-49 years, male

43.2

GTEX-12584-2126-SM-5FQUM

40-49 years, male

40.8

GTEX-13S86-0926-SM-5SI6I

40-49 years, male

39.8

GTEX-ZE7O-1526-SM-5J1NH

50-59 years, female

39.5

GTEX-13NZ9-2026-SM-5KM1U

50-59 years, male

38.6

GTEX-13N11-1826-SM-5IJDS

50-59 years, female

37.8

GTEX-13O3P-0926-SM-5IFFI

50-59 years, male

36.2

GTEX-WWTW-1326-SM-4MVNT

50-59 years, male

35.7

GTEX-Y8E4-1226-SM-5IFIM

40-49 years, male

35.6

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	18.7

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 18.7

FF:10010-101C1

65,65,76 years, mixed

18.7