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SFPQ

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:47.3TPM
GTEx:40.5RPKM
FANTOM5:316.7Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Glandular cells:High
Endothelial cells:Low
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA047513

  

Antibody HPA054689

  

Antibody CAB009886

  

Glandular cells

 High   High   Medium  

Endothelial cells

 High   Medium  

Peripheral nerve/ganglion

 High  
     
     
     

COLON - HPA RNA-seq

Average TPM

47.3
overview Male, age 54 Sample 1
TPM: 50.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 32.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 43.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 53.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 28.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 48
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 64.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 53.5
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 51.7
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 55.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 49.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 46.4
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 37.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

40.5

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 39.5
Samples: 149

Max RPKM: 84.9
Min RPKM: 21.2
Std RPKM: 9.9
Median RPKM: 38.2
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 84.9
GTEX-13U4I-2626-SM-5SI9C 40-49 years, female 73.8
GTEX-14A5H-1626-SM-5SIAN 60-69 years, male 69.7
GTEX-ZY6K-1326-SM-5GZWP 50-59 years, male 67.5
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 65.2
GTEX-11TUW-2326-SM-5EQMO 60-69 years, male 64.1
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 62.1
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 61.2
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 53.7
GTEX-13PVQ-2726-SM-5L3H7 50-59 years, male 53.6
Show all
Colon - Transverse
RPKM: 41.3
Samples: 196

Max RPKM: 96.8
Min RPKM: 17.7
Std RPKM: 8.6
Median RPKM: 40.4
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 96.8
GTEX-ZY6K-1226-SM-5GZYL 50-59 years, male 64.3
GTEX-13U4I-2426-SM-5LU34 40-49 years, female 62.0
GTEX-11EQ9-1426-SM-5987G 30-39 years, male 61.5
GTEX-133LE-1526-SM-5IFEN 20-29 years, female 58.9
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 58.1
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 57.1
GTEX-147F3-1926-SM-5SIB9 50-59 years, female 55.0
GTEX-14ICL-1226-SM-5S2RD 30-39 years, male 54.9
GTEX-11NSD-1626-SM-5986U 20-29 years, male 54.1
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

316.7

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 316.7
FF:10014-101C5 62,83,84 years, mixed 316.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.