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LGALS8

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:18.8TPM
GTEx:3.9RPKM
FANTOM5:51.3Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA030491

  

Endothelial cells

 Low  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 Medium  
 
 

COLON - HPA RNA-seq

Average TPM

18.8
overview Male, age 54 Sample 1
TPM: 18.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 15.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 10.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 19.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 14.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 16
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 22.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 18.9
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 21.7
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 22.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 26.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 22.5
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 15.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

3.9

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 3.7
Samples: 149

Max RPKM: 8.8
Min RPKM: 1.1
Std RPKM: 1.2
Median RPKM: 3.5
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 8.8
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 7.7
GTEX-14A5H-1626-SM-5SIAN 60-69 years, male 7.3
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 6.5
GTEX-12WSJ-1426-SM-5GCON 40-49 years, female 6.3
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 6.3
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 6.0
GTEX-12WSL-1826-SM-5LZW9 50-59 years, male 5.8
GTEX-Y5LM-1426-SM-5RQJL 40-49 years, female 5.7
GTEX-ZAB4-2426-SM-5HL8A 40-49 years, male 5.7
Show all
Colon - Transverse
RPKM: 4.1
Samples: 196

Max RPKM: 7.8
Min RPKM: 2.0
Std RPKM: 1.0
Median RPKM: 3.8
GTEX-144GM-1226-SM-5LU52 20-29 years, male 7.8
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 7.6
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 7.5
GTEX-ZY6K-1226-SM-5GZYL 50-59 years, male 7.0
GTEX-13CF3-1426-SM-5K7YY 60-69 years, female 6.9
GTEX-ZV6S-1226-SM-59HLH 40-49 years, female 6.9
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 6.7
GTEX-11P7K-1526-SM-5EGI7 30-39 years, male 6.6
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 6.3
GTEX-ZV7C-1526-SM-5NQ72 50-59 years, male 6.2
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

51.3

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 51.3
FF:10014-101C5 62,83,84 years, mixed 51.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.