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CD48

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:24.5TPM
GTEx:2.1RPKM
FANTOM5:15.7Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody CAB002497

  

Endothelial cells

 Not detected  

Glandular cells

 Not detected  

Peripheral nerve/ganglion

 Not detected  
 
 
 

COLON - HPA RNA-seq

Average TPM

24.5
overview Male, age 54 Sample 1
TPM: 11.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 30
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 12.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 6.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 30.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 18.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 38.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 29.6
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 33.7
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 23.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 26.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 37.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 19.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

2.1

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 0.6
Samples: 149

Max RPKM: 7.0
Min RPKM: 0.0
Std RPKM: 0.8
Median RPKM: 0.4
GTEX-13X6K-2726-SM-5O9DG 60-69 years, female 7.0
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 4.6
GTEX-11PRG-2026-SM-5GU5F 50-59 years, male 4.3
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 2.7
GTEX-ZAB4-2426-SM-5HL8A 40-49 years, male 2.7
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 2.5
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 2.3
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 2.0
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 1.9
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 1.5
Show all
Colon - Transverse
RPKM: 3.2
Samples: 196

Max RPKM: 17.3
Min RPKM: 0.1
Std RPKM: 2.8
Median RPKM: 2.4
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 17.3
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 16.0
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 14.0
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 11.4
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 10.1
GTEX-Q2AH-1226-SM-48TZL 40-49 years, male 10.0
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 9.4
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 9.2
GTEX-WHWD-1226-SM-4OOS1 50-59 years, male 9.1
GTEX-XMK1-1726-SM-4B64Z 40-49 years, male 8.8
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

15.7

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 15.7
FF:10014-101C5 62,83,84 years, mixed 15.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.