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Gene name

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Chromosome

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Reliability

Reliability

Reliability

Validation

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Validation

Method

Validation

Method

Validation

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Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

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Category

Score

Score

Score

Antibodies

Column

 
 
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PATHOLOGY ATLAS MELANOMA

GENE/PROTEIN

Antibody validation

Dictionary

Melanoma

MELANOMA - Survival analysis

Best separation

Median separation

Expression cutoff

217.5 FPKM 167.0 FPKM

3-year survival high

0% 0%

3-year survival low

38% 44%

Log-rank P value

1.09e-1 8.89e-1

Interactive survival scatter plot (individual patient data)




Stage:



TCGA RNA samples

Average FPKM

186.7

Number of samples

102

Samples

Sample

Description

FPKM

TCGA-FW-A5DX-01A 71 years, male, white, stage:iiic 516.4
TCGA-EB-A6QY-01A 71 years, male, white, stage:iic 500.1
TCGA-BF-A3DJ-01A 36 years, female, white, stage:iiib 496.5
TCGA-BF-AAP6-01A 55 years, male, white, stage:iii 454.0
TCGA-BF-A3DM-01A 63 years, male, white, stage:iia 360.2
TCGA-HR-A5NC-01A 90 years, female 340.2
TCGA-BF-AAP1-01A 86 years, male, white, stage:iic 332.6
TCGA-BF-A5EP-01A 75 years, female, white, stage:iiic 325.1
TCGA-EB-A6QZ-01A 76 years, female, white, stage:iia 290.6
TCGA-GF-A769-01A 39 years, male, white, stage:iic 289.8
TCGA-BF-A3DN-01A 81 years, female, white, stage:iiic 286.0
TCGA-EB-A51B-01A 53 years, male, white, stage:iic 284.4
TCGA-D9-A4Z2-01A 50 years, male, white, stage:iiic 283.7
TCGA-EB-A4IS-01A 77 years, male, white, stage:iib 279.3
TCGA-XV-A9W5-01A 51 years, male, white, stage:i/ii nos 275.1
TCGA-EB-A6R0-01A 58 years, female, white, stage:iic 274.7
TCGA-BF-A1PZ-01A 71 years, female, white, stage:iib 261.3
TCGA-EB-A3XC-01A 74 years, male, white, stage:iic 260.5
TCGA-EB-A3XB-01A 63 years, male, white, stage:ii 255.7
TCGA-EB-A24D-01A 72 years, male, white, stage:iiib 251.2
TCGA-EB-A551-01A 78 years, female, white, stage:iiic 246.2
TCGA-EB-A82C-01A 70 years, female, asian, stage:iic 243.8
TCGA-D9-A3Z4-01A 54 years, male, white, stage:iiic 242.3
TCGA-XV-AAZV-01A 56 years, female, white, stage:ii 242.1
TCGA-EB-A3XF-01A 57 years, male, white, stage:iic 238.7
TCGA-EB-A3Y6-01A 56 years, female, white, stage:iic 235.2
TCGA-EB-A44O-01A 69 years, male, white, stage:iib 233.1
TCGA-GF-A2C7-01A 48 years, male, white, stage:iic 223.4
TCGA-EB-A431-01A 34 years, male, white, stage:iic 223.1
TCGA-GN-A8LN-01A 68 years, male, white, stage:iic 221.7
TCGA-BF-A3DL-01A 84 years, female, white, stage:iiib 217.6
TCGA-EB-A5FP-01A 65 years, female, white, stage:iv 217.4
TCGA-FR-A2OS-01A 49 years, female, white, stage:iic 214.5
TCGA-GN-A26C-01A 77 years, male, white, stage:iiic 210.5
TCGA-EB-A42Z-01A 49 years, male, asian, stage:iiic 208.1
TCGA-EB-A1NK-01A 48 years, male, white, stage:iic 202.4
TCGA-ER-A19T-01A 51 years, male, white, stage:iv 200.2
TCGA-BF-A1PX-01A 56 years, male, white, stage:iiib 195.4
TCGA-BF-A1Q0-01A 80 years, male, white, stage:iic 193.8
TCGA-FR-A728-01A 54 years, female, white, stage:iiib 192.5
TCGA-BF-A1PU-01A 46 years, female, white, stage:iic 191.2
TCGA-D9-A4Z5-01A 68 years, male, white, stage:iib 189.9
TCGA-IH-A3EA-01A 61 years, male, white, stage:iic 186.2
TCGA-GN-A263-01A 24 years, male, white, stage:iv 181.4
TCGA-EB-A44N-01A 59 years, male, white, stage:iic 178.7
TCGA-BF-AAP4-01A 61 years, male, white, stage:iic 175.7
TCGA-WE-A8K4-01A 85 years, male, white, stage:iib 174.5
TCGA-EB-A299-01A 63 years, male, white, stage:iia 173.2
TCGA-EB-A85J-01A 66 years, female, white, stage:iib 169.9
TCGA-XV-AAZW-01A 62 years, female, white, stage:ii 169.3
TCGA-EB-A4IQ-01A 42 years, female, asian, stage:iiib 168.7
TCGA-BF-A5EO-01A 65 years, male, white, stage:iic 165.4
TCGA-BF-A1PV-01A 74 years, female, white, stage:iic 165.0
TCGA-FS-A1ZN-01A 43 years, male, white, stage:iiia 164.3
TCGA-ER-A42H-01A 77 years, male, white 164.0
TCGA-ER-A196-01A 64 years, female, white, stage:iic 162.5
TCGA-EB-A3XD-01A 53 years, female, white, stage:iic 162.5
TCGA-EB-A24C-01A 56 years, male, white 160.4
TCGA-EB-A41A-01A 90 years, male, white, stage:iic 156.4
TCGA-EB-A85I-01A 66 years, male, white, stage:iic 154.6
TCGA-EB-A4XL-01A 56 years, female, white, stage:iic 153.1
TCGA-FR-A3R1-01A 69 years, male, white, stage:iic 152.6
TCGA-BF-AAP2-01A 62 years, male, white, stage:iib 152.4
TCGA-EB-A44P-01A 58 years, female, white, stage:iic 150.9
TCGA-EB-A3XE-01A 77 years, female, white, stage:iia 150.6
TCGA-BF-A9VF-01A 77 years, male, white, stage:iic 149.0
TCGA-EB-A4P0-01A 82 years, male, white, stage:iic 147.8
TCGA-XV-A9W2-01A 81 years, male, white, stage:i 147.7
TCGA-YG-AA3N-01A 67 years, male, stage:iic 147.2
TCGA-EB-A5SE-01A 73 years, male, white, stage:iib 145.6
TCGA-BF-AAOX-01A 83 years, male, white, stage:iic 144.7
TCGA-EB-A97M-01A 66 years, male, white, stage:iic 144.3
TCGA-EB-A550-01A 75 years, female, white, stage:iic 141.2
TCGA-EB-A42Y-01A 73 years, female, asian, stage:iic 140.5
TCGA-EB-A57M-01A 56 years, male, asian, stage:iiib 139.4
TCGA-BF-AAOU-01A 73 years, female, white, stage:iic 138.1
TCGA-BF-A5EQ-01A 63 years, male, white, stage:iic 137.0
TCGA-FR-A726-01A 90 years, male, white, stage:iic 135.2
TCGA-BF-AAP7-01A 76 years, female, white, stage:iic 131.9
TCGA-EB-A82B-01A 58 years, female, asian, stage:iii 129.1
TCGA-EB-A3HV-01A 37 years, male, white, stage:iic 126.3
TCGA-ER-A2NF-01A 53 years, male, white, stage:iiib 124.4
TCGA-GN-A4U5-01A 61 years, female, white, stage:ib 124.0
TCGA-ER-A19K-01A 79 years, female, white, stage:iic 115.8
TCGA-EB-A5VU-01A 56 years, male, asian, stage:iiib 115.8
TCGA-BF-A5ES-01A 76 years, female, white, stage:iic 112.4
TCGA-ER-A194-01A 77 years, male, white 101.2
TCGA-BF-A5ER-01A 63 years, male, white, stage:iic 100.2
TCGA-EB-A41B-01A 76 years, female, white, stage:iic 96.7
TCGA-EB-A5UM-01A 48 years, female, white, stage:iic 81.2
TCGA-BF-AAP8-01A 58 years, male, white, stage:iic 79.4
TCGA-D9-A4Z3-01A 73 years, female, white, stage:iiic 73.2
TCGA-XV-AAZY-01A 76 years, female, white, stage:iiic 72.6
TCGA-EB-A4OY-01A 65 years, female, white, stage:iiib 68.5
TCGA-XV-A9VZ-01A 90 years, female, white, stage:ii 66.1
TCGA-D3-A5GT-01A 43 years, male, white, stage:iiic 61.4
TCGA-ER-A2NB-01A 57 years, male, white, stage:iiib 41.3
TCGA-EB-A4OZ-01A 42 years, female, white, stage:iiic 37.6
TCGA-EB-A5SF-01A 78 years, female, white, stage:iic 36.8
TCGA-EB-A3Y7-01A 86 years, female, white, stage:iiib 35.7
TCGA-EB-A553-01A 62 years, male, white, stage:iic 34.9
TCGA-DA-A960-01A 73 years, male, white, stage:iib 32.5
Show all

MELANOMA - Protein expression

 

Antibody HPA008297

Antibody HPA025922

Antibody CAB019277

 Antibody staining
  High
  Medium
  Low
  Not detected
    
 Intensity
  Strong
  Moderate
  Weak
  Negative
    
 Quantity
  >75%
  75%-25%
  <25%
  Rare
  Negative
    
 Location
  Cytoplasmic/membranous,nuclear
  Cytoplasmic/membranous
  Nuclear
  None
    

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