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SPP1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:11.1TPM
GTEx:17.7RPKM
FANTOM5:41.8Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Medium
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA027541

  

Antibody CAB002212

  

Endothelial cells

 Not detected   Low  

Glandular cells

 Medium   High  

Peripheral nerve/ganglion

 Not detected   High  
   
   
   

COLON - HPA RNA-seq

Average TPM

11.1
overview Male, age 54 Sample 1
TPM: 18.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 8.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 7.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 12.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 12.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 4.2
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 18.3
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 6.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 9.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 19.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 10.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

17.7

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 26.3
Samples: 149

Max RPKM: 258.3
Min RPKM: 1.1
Std RPKM: 27.2
Median RPKM: 19.3
GTEX-12ZZW-2426-SM-5DUWE 50-59 years, male 258.3
GTEX-ZAB4-2426-SM-5HL8A 40-49 years, male 144.9
GTEX-12WSJ-1426-SM-5GCON 40-49 years, female 100.5
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 85.4
GTEX-ZYY3-2226-SM-5E45A 60-69 years, female 85.3
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 76.3
GTEX-ZV6S-1126-SM-57WE9 40-49 years, female 70.8
GTEX-12WSL-1826-SM-5LZW9 50-59 years, male 63.7
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 63.3
GTEX-14C39-1626-SM-5S2P4 40-49 years, male 63.3
Show all
Colon - Transverse
RPKM: 11.2
Samples: 196

Max RPKM: 97.5
Min RPKM: 0.7
Std RPKM: 13.4
Median RPKM: 7.0
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 97.5
GTEX-ZAB4-2226-SM-5HL97 40-49 years, male 97.5
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 69.1
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 45.2
GTEX-145MO-2426-SM-5NQ9W 60-69 years, male 45.0
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 42.5
GTEX-12WSJ-1526-SM-5GCNI 40-49 years, female 36.7
GTEX-S341-1426-SM-4AD6U 40-49 years, female 36.5
GTEX-145LS-2726-SM-5Q5D8 60-69 years, female 35.2
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 34.0
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

41.8

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 41.8
FF:10014-101C5 62,83,84 years, mixed 41.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.