Tissue expression of SATB2 - Staining in adipose tissue - The Human Protein Atlas

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SATB2

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TISSUE

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CELL

PATHOLOGY

TISSUE ATLAS PRIMARY DATA ADIPOSE TISSUE

GENE/PROTEIN

Antibody validation

Dictionary
	Soft tissue


Tissue proteome
	Adipose

SOFT TISSUE - Expression summary

Protein expression

h

m

l

n

RNA expression

HPA:	2.9	TPM
GTEx:	1.2	RPKM
FANTOM5:	2.3	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Chondrocytes:	Not detected
Fibroblasts:	Not detected
Peripheral nerve:	Not detected

Antibody staining	Antibody HPA001042		Antibody CAB023669		Antibody CAB062562		Antibody CAB067751		Antibody CAB068229		Antibody CAB068230		Antibody CAB068231
Adipocytes	Not detected		Not detected		Not detected
Chondrocytes	Not detected		Not detected		Not detected
Fibroblasts	Not detected		Not detected		Not detected		Not detected		Not detected		Not detected
Peripheral nerve	Not detected		Not detected

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Chondrocytes:	Not detected
Fibroblasts:	Not detected
Peripheral nerve:	Not detected

Antibody staining	Antibody HPA001042		Antibody HPA029543		Antibody CAB023669		Antibody CAB062562		Antibody CAB067751		Antibody CAB068229		Antibody CAB068230		Antibody CAB068231
Adipocytes	Not detected		Not detected		Not detected		Not detected		Not detected		Not detected		Not detected		Not detected
Chondrocytes	Not detected
Fibroblasts	Not detected		Not detected		Not detected		Not detected		Not detected		Not detected		Not detected		Not detected
Peripheral nerve	Not detected		Not detected		Not detected		Not detected		Not detected		Not detected

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	2.9

N/A

Female, age 80

Sample 1
TPM: 4.2

Cell types%

Adipocytes: 95
Other cell types: 5

N/A

Female, age 45

Sample 2
TPM: 3

N/A

Female, age 57

Sample 3
TPM: 2.9

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

overview

Female, age 74

Sample 4
TPM: 2.4

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

overview

Female, age 59

Sample 5
TPM: 2.2

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	1.2

GTEx sample id

Sample description

RPKM

Adipose - Subcutaneous
RPKM: 1.4

Samples: 350

Max RPKM: 3.4
Min RPKM: 0.4
Std RPKM: 0.3
Median RPKM: 1.3

GTEX-R55F-1426-SM-2TF53

50-59 years, male

3.4

GTEX-XMD2-0226-SM-4WWEE

60-69 years, female

2.6

GTEX-14C5O-0226-SM-5SI6O

60-69 years, male

2.5

GTEX-POYW-0726-SM-2XCEO

60-69 years, male

2.5

GTEX-11EQ8-0226-SM-5EQ5G

60-69 years, male

2.4

GTEX-13N2G-2726-SM-5J1MG

60-69 years, male

2.3

GTEX-Q734-1826-SM-2I3EL

40-49 years, female

2.3

GTEX-12126-0426-SM-5Q5AP

20-29 years, male

2.2

GTEX-13NZ9-0526-SM-5J1OX

50-59 years, male

2.2

GTEX-Q2AI-1426-SM-2S1P5

40-49 years, male

2.2

Show all

Adipose - Visceral (Omentum)
RPKM: 0.8

Samples: 227

Max RPKM: 3.3
Min RPKM: 0.2
Std RPKM: 0.3
Median RPKM: 0.7

GTEX-WWTW-1326-SM-4MVNT

50-59 years, male

3.3

GTEX-VUSG-1426-SM-3GIJN

50-59 years, male

2.4

GTEX-13NYS-0726-SM-5J1OR

60-69 years, male

2.2

GTEX-ZF28-1426-SM-5S2OG

60-69 years, male

2.0

GTEX-132AR-0526-SM-5J2MJ

50-59 years, female

1.9

GTEX-14AS3-0426-SM-5QGQK

40-49 years, female

1.9

GTEX-UPK5-1826-SM-3GAEB

40-49 years, male

1.9

GTEX-13IVO-2426-SM-5K7V9

70-79 years, male

1.8

GTEX-13PDP-1226-SM-5K7TW

60-69 years, male

1.8

GTEX-XUZC-1126-SM-4BOPZ

30-39 years, female

1.8

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	2.3

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 2.3

65,65,76 years, mixed

2.3

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.