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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:50.8TPM
GTEx:32.1RPKM
FANTOM5:27.3Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Medium
Peripheral nerve:Low
 

Antibody staining

Antibody HPA004799

  

Antibody HPA022271

  

Antibody CAB019284

  

Adipocytes

 Low   Low   Medium  

Fibroblasts

 Not detected   Not detected   Medium  

Peripheral nerve

 Low   Not detected   Low  
     
     
     

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Medium
Peripheral nerve:Not available
 
 

Antibody staining

Antibody HPA004799

  

Antibody HPA022271

  

Antibody CAB019284

  

Adipocytes

 Low   Medium   Medium  

Fibroblasts

 Not detected   Not detected   Medium  

Peripheral nerve

 Not detected   Not detected  
        
     
     
     

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

50.8
N/A Female, age 80 Sample 1
TPM: 65.4
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 70.6
N/A Female, age 57 Sample 3
TPM: 71.5
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 17.3
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 29.4
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

32.1

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 30.9
Samples: 350

Max RPKM: 107.9
Min RPKM: 7.1
Std RPKM: 12.5
Median RPKM: 28.3
GTEX-YB5E-2126-SM-5IFI7 40-49 years, male 107.9
GTEX-ZP4G-2326-SM-57WEM 20-29 years, female 88.9
GTEX-Y5V6-2526-SM-5IFJV 60-69 years, male 77.4
GTEX-ZXES-2026-SM-5NQ6R 30-39 years, female 76.8
GTEX-117YX-2226-SM-5EGJJ 50-59 years, male 64.7
GTEX-ZQG8-1526-SM-5HL65 60-69 years, female 60.6
GTEX-11P7K-2026-SM-5GU74 30-39 years, male 60.1
GTEX-11EQ9-2526-SM-5HL66 30-39 years, male 58.1
GTEX-U4B1-1726-SM-3DB9F 40-49 years, male 58.1
GTEX-11EM3-2326-SM-5H12B 20-29 years, female 57.8
Show all
Adipose - Visceral (Omentum)
RPKM: 34.0
Samples: 227

Max RPKM: 89.6
Min RPKM: 6.7
Std RPKM: 18.8
Median RPKM: 29.9
GTEX-Y5LM-0826-SM-4VDSW 40-49 years, female 89.6
GTEX-11EQ9-1126-SM-5987I 30-39 years, male 88.6
GTEX-13O21-3126-SM-5J1OI 50-59 years, male 87.8
GTEX-Y8LW-0926-SM-4VBQ8 50-59 years, female 80.3
GTEX-ZP4G-1326-SM-5EGIW 20-29 years, female 80.3
GTEX-XAJ8-0226-SM-4GIB2 40-49 years, male 79.9
GTEX-WH7G-1126-SM-3NMBK 40-49 years, male 73.3
GTEX-1122O-0926-SM-5N9C9 60-69 years, female 73.0
GTEX-145LV-1026-SM-5O9AE 50-59 years, male 72.8
GTEX-ZLWG-0726-SM-5S2NG 50-59 years, female 72.3
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

27.3

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 27.3
FF:10010-101C1 65,65,76 years, mixed 27.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.