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ATF1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:18.7TPM
GTEx:6.3RPKM
FANTOM5:51.1Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:High
 

Antibody staining

Antibody HPA055069

  

Antibody CAB016222

  

Endothelial cells

 Not detected   High  

Glandular cells

 Medium   High  

Peripheral nerve/ganglion

 High  
   
   
   

COLON - HPA RNA-seq

Average TPM

18.7
overview Male, age 54 Sample 1
TPM: 18.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 23.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 20.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 16.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 13.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 21.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 18.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 15.5
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 15.1
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 21.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 22.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 20.6
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 14.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

6.3

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 6.1
Samples: 149

Max RPKM: 10.0
Min RPKM: 3.0
Std RPKM: 1.2
Median RPKM: 6.0
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 10.0
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 9.6
GTEX-145LS-2926-SM-5O99G 60-69 years, female 9.2
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 8.7
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 8.6
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 8.4
GTEX-12ZZY-2726-SM-5EQ45 60-69 years, male 8.3
GTEX-WHWD-1526-SM-4OORV 50-59 years, male 8.3
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 8.3
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 8.1
Show all
Colon - Transverse
RPKM: 6.5
Samples: 196

Max RPKM: 11.6
Min RPKM: 2.7
Std RPKM: 1.5
Median RPKM: 6.4
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 11.6
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 11.4
GTEX-139YR-2126-SM-5KM11 50-59 years, male 11.1
GTEX-ZYWO-1626-SM-5E44H 40-49 years, female 9.6
GTEX-1128S-1626-SM-5H12O 60-69 years, female 9.4
GTEX-13S86-1626-SM-5Q5C5 40-49 years, male 9.4
GTEX-WFG7-1526-SM-4LVMG 20-29 years, male 9.3
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 9.2
GTEX-145LS-2726-SM-5Q5D8 60-69 years, female 9.2
GTEX-QEL4-1926-SM-4R1JI 50-59 years, male 9.2
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

51.1

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 51.1
FF:10014-101C5 62,83,84 years, mixed 51.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.