Tissue expression of PRICKLE4 - Summary - The Human Protein Atlas

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PRICKLE4

TISSUE

CELL

PATHOLOGY

TISSUE ATLAS

GENE/PROTEIN

Dictionary


Tissue proteome

GENERAL INFORMATION
Gene name	PRICKLE4
Gene description	Prickle homolog 4
Protein class	Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	2
	SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:	Mixed
GTEx:	Expressed in all
FANTOM5:	Mixed

Protein evidence

Evidence at transcript level

DATA RELIABILITY
Reliability score	Pending normal tissue annotation.

RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM)

Protein expression (score)

Brain

N/A

Cerebral cortex

N/A

Hippocampus

N/A

N/A

Caudate

N/A

N/A

Cerebellum

N/A

N/A

Endocrine tissues

N/A

Thyroid gland

N/A

Parathyroid gland

N/A

Adrenal gland

N/A

Bone marrow & immune system

N/A

Appendix

N/A

Bone marrow

N/A

Lymph node

N/A

Tonsil

N/A

Spleen

N/A

Muscle tissues

N/A

Heart muscle

N/A

Skeletal muscle

N/A

Smooth muscle

N/A

Lung

N/A

Nasopharynx

N/A

N/A

Bronchus

N/A

N/A

Lung

N/A

Liver & gallbladder

N/A

Liver

N/A

Gallbladder

N/A

Pancreas

N/A

Pancreas

N/A

Gastrointestinal tract

N/A

Oral mucosa

N/A

N/A

Salivary gland

N/A

Esophagus

N/A

Stomach

N/A

Duodenum

N/A

Small intestine

N/A

Colon

N/A

Rectum

N/A

Kidney & urinary bladder

N/A

Kidney

N/A

Urinary bladder

N/A

Male tissues

N/A

Testis

N/A

Epididymis

N/A

Prostate

N/A

Seminal vesicle

N/A

Female tissues

N/A

Breast

N/A

Vagina

N/A

N/A

Cervix, uterine

N/A

Endometrium

N/A

Fallopian tube

N/A

Ovary

N/A

Placenta

N/A

Adipose & soft tissue

N/A

Adipose tissue

N/A

Soft tissue

N/A

N/A

Skin

N/A

Skin

N/A

PROTEIN EXPRESSION OVERVIEW
Pending normal tissue annotation.

RNA EXPRESSION OVERVIEW
HPA dataset Organ Expression Alphabetical RNA tissue category: Mixed
GTEx dataset Organ Expression Alphabetical RNA tissue category: Expressed in all
FANTOM5 dataset Organ Expression Alphabetical RNA tissue category: Mixed

GENE INFORMATION
Gene name	PRICKLE4 (HGNC Symbol)
Synonyms	C6orf49, DKFZp761H221, OEBT
Description	Prickle homolog 4 (HGNC Symbol)
Entrez gene summary	C6ORF49 is a member of the LIM domain protein family (Teufel et al., 2005 [PubMed 15702247]).[supplied by OMIM, Mar 2008]
Chromosome	6
Cytoband	p21.1
Chromosome location (bp)	41780349 - 41790141
Protein evidence	Evidence at transcript level (all genes)
Ensembl	ENSG00000124593 (version 83.38)
Entrez gene	29964
UniProt	Q2TBC4 (UniProt - Evidence at transcript level)
neXtProt	NX_Q2TBC4
Antibodypedia	PRICKLE4 antibodies

PROTEIN BROWSER

PRICKLE4-201	PRICKLE4-202

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
PRICKLE4-201 ENSP00000352128 ENST00000359201	Q2TBC4 [Direct mapping] Prickle-like protein 4 Show all	Predicted intracellular proteins Show all	GO:0003674 [molecular_function] GO:0005634 [nucleus] GO:0008150 [biological_process] GO:0008270 [zinc ion binding] Show all	344 aa 37.6 kDa	No	0
PRICKLE4-202 ENSP00000404911 ENST00000458694	Q2TBC4 [Direct mapping] Prickle-like protein 4 Show all	Predicted intracellular proteins Show all	GO:0003674 [molecular_function] GO:0005634 [nucleus] GO:0008150 [biological_process] GO:0008270 [zinc ion binding] Show all	384 aa 41.8 kDa	No	0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.