Tissue expression of SPDEF - Staining in breast

BREAST - Expression summary

RNA expression

HPA:	42.1	TPM
GTEx:	29.3	RPKM
FANTOM5:	55.5	Tags Per Million

BREAST - Annotated protein expression
Pending normal tissue analysis

BREAST - HPA RNA-seq

Average TPM	42.1

Female, age 52

Sample 1
TPM: 33.6

Cell types%

Glandular cells: 15
Adipocytes: 5
Other cell types: 80

Female, age 80

Sample 2
TPM: 51.1

Cell types%

Glandular cells: 5
Adipocytes: 15
Other cell types: 80

Female, age 47

Sample 3
TPM: 78

Cell types%

Glandular cells: 5
Adipocytes: 5
Other cell types: 90

Female, age 38

Sample 4
TPM: 5.7

Cell types%

Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM	29.3

GTEx sample id

Sample description

RPKM

Breast - Mammary Tissue
RPKM: 29.3

Samples: 214

Max RPKM: 266.1
Min RPKM: 0.0
Std RPKM: 41.4
Median RPKM: 14.0

GTEX-QEG5-0726-SM-4R1JQ

20-29 years, male

266.1

GTEX-T5JC-2126-SM-32PMO

20-29 years, male

235.6

GTEX-14ABY-2126-SM-5QGQZ

50-59 years, male

174.0

GTEX-13NZB-2126-SM-5MR4Y

30-39 years, male

160.6

GTEX-145LT-0726-SM-5S2VM

40-49 years, male

160.1

GTEX-ZU9S-1926-SM-5NQBP

30-39 years, male

151.5

GTEX-QEL4-2126-SM-447AE

50-59 years, male

129.5

GTEX-U412-1826-SM-4DXTJ

60-69 years, male

124.9

GTEX-ZVTK-0326-SM-51MRR

20-29 years, male

122.7

GTEX-R55F-1726-SM-2TF4R

50-59 years, male

120.4

Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million	55.5

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 55.5

FF:10080-102A8

77 years, female

55.5