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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:338.9TPM
GTEx:213.6RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Not detected
Neuronal cells:Medium
Neuropil:Medium
 

Antibody staining

Antibody HPA037915

 

Antibody HPA037916

 

Antibody CAB008661

 

Endothelial cells

Not detected   Low   Not detected  

Glial cells

Not detected   Low   Not detected  

Neuronal cells

Not detected   Medium   High  

Neuropil

Medium   Medium   Medium  
     
     
     

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

338.9

N/A Male, age 5 Sample 1
TPM: 402.6
overview Female, age 40 Sample 2
TPM: 267.2
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70 Sample 3
TPM: 346.9
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

213.6

GTEx sample id

Sample description

RPKM

Brain - Cortex
RPKM: 202.9
Samples: 114

Max RPKM: 335.1
Min RPKM: 105.1
Std RPKM: 42.3
Median RPKM: 213.1
GTEX-11OC5-0726-SM-5P9JK 60-69 years, male 335.1
GTEX-12WSC-3026-SM-5GCNF 50-59 years, male 275.9
GTEX-YJ89-3026-SM-5IFJI 60-69 years, male 268.1
GTEX-WVLH-3026-SM-3MJG9 50-59 years, male 265.1
GTEX-13O3Q-2926-SM-5KM45 50-59 years, male 261.5
GTEX-14BMV-3026-SM-5S2PQ 50-59 years, male 259.9
GTEX-ZE7O-3126-SM-5HL5X 50-59 years, female 259.6
GTEX-13SLX-3126-SM-5S2Q5 50-59 years, female 257.7
GTEX-145MG-3026-SM-5RQJA 50-59 years, male 255.4
GTEX-117XS-3026-SM-5N9CA 60-69 years, male 254.6
GTEX-13VXU-2926-SM-5LU5C 50-59 years, male 254.1
GTEX-13FXS-3126-SM-5J2NN 50-59 years, male 252.6
GTEX-12126-1026-SM-5P9JJ 20-29 years, male 250.1
GTEX-1399T-3026-SM-5KLZC 60-69 years, male 250.0
GTEX-11DXY-3226-SM-5GIDE 60-69 years, male 249.9
GTEX-X585-3026-SM-46MWF 50-59 years, male 249.5
GTEX-QVJO-1426-SM-2S1QY 60-69 years, female 248.1
GTEX-1313W-3126-SM-5LZUI 50-59 years, female 244.6
GTEX-13O3O-3126-SM-5KM3H 60-69 years, female 240.7
GTEX-Z93S-2926-SM-57WB9 50-59 years, male 239.6
GTEX-11GSO-2926-SM-5HL73 60-69 years, male 239.4
GTEX-ZYFD-3026-SM-5E44C 50-59 years, male 237.8
GTEX-WL46-2926-SM-3LK82 50-59 years, male 237.2
GTEX-12ZZW-2926-SM-5LZUP 50-59 years, male 236.1
GTEX-Y111-2726-SM-4TT3N 50-59 years, male 236.0
GTEX-145MH-3026-SM-5Q5DZ 50-59 years, male 235.3
GTEX-Y8DK-0826-SM-4TT3T 60-69 years, male 234.9
GTEX-Q2AG-2926-SM-2HMJ3 40-49 years, female 233.0
GTEX-13OW6-3026-SM-5J2MI 50-59 years, male 232.6
GTEX-13JUV-2926-SM-5LZX7 40-49 years, female 232.0
GTEX-11PRG-2926-SM-5987A 50-59 years, male 231.4
GTEX-13FLW-1426-SM-5K7YE 50-59 years, male 231.3
GTEX-ZVT3-3026-SM-5E43N 60-69 years, female 229.1
GTEX-13OVH-3026-SM-5MR4N 70-79 years, male 228.3
GTEX-X4XX-3026-SM-3NMB2 60-69 years, male 228.1
GTEX-145LS-3126-SM-5Q5BY 60-69 years, female 225.8
GTEX-13OW8-2826-SM-5L3GC 60-69 years, male 225.2
GTEX-11NV4-2126-SM-5N9DS 60-69 years, male 224.6
GTEX-RU72-3026-SM-5SI7Y 50-59 years, female 223.8
GTEX-13NYB-3026-SM-5IJD7 40-49 years, male 223.1
GTEX-T6MN-2626-SM-32PMQ 50-59 years, male 222.4
GTEX-12ZZX-2926-SM-5GCOQ 40-49 years, female 221.8
GTEX-12ZZY-3026-SM-5GCOU 60-69 years, male 221.7
GTEX-XOTO-3026-SM-4B65M 50-59 years, male 219.7
GTEX-13NYS-3126-SM-5KLYV 60-69 years, male 219.2
GTEX-1192X-3126-SM-5N9BY 50-59 years, male 218.6
GTEX-WZTO-2926-SM-3NM9I 40-49 years, male 216.5
GTEX-11NUK-2926-SM-5A5MD 50-59 years, male 216.3
GTEX-144GL-3026-SM-5Q5CW 50-59 years, male 216.3
GTEX-145MF-2726-SM-5O995 50-59 years, male 216.2
GTEX-WHSE-3026-SM-3P5ZH 20-29 years, male 215.8
GTEX-131YS-3126-SM-5KLYT 60-69 years, female 215.4
GTEX-WWYW-3126-SM-3NB39 50-59 years, female 215.4
GTEX-R55F-1326-SM-5S2V4 50-59 years, male 215.3
GTEX-11DXW-1126-SM-5H12Q 40-49 years, male 214.8
GTEX-YFC4-3126-SM-5PNV6 40-49 years, female 214.8
GTEX-13X6J-3026-SM-5Q5CU 50-59 years, male 213.2
GTEX-14ASI-3026-SM-5S2PN 60-69 years, male 213.0
GTEX-11OF3-2926-SM-5HL78 60-69 years, male 212.9
GTEX-ZAK1-3026-SM-5S2MJ 50-59 years, female 212.2
GTEX-11ZUS-2926-SM-5FQSL 30-39 years, male 209.6
GTEX-13NYC-2826-SM-5K7WR 60-69 years, male 209.1
GTEX-ZUA1-3026-SM-59HJC 40-49 years, male 208.7
GTEX-11ONC-2926-SM-5P9JM 60-69 years, male 207.2
GTEX-XLM4-3026-SM-4AT6L 60-69 years, male 205.7
GTEX-13FHO-3026-SM-5J1O9 60-69 years, male 203.8
GTEX-132Q8-3026-SM-5PNVG 60-69 years, male 203.6
GTEX-11EMC-3226-SM-5EGKW 60-69 years, female 201.3
GTEX-11EI6-3026-SM-5GZZO 60-69 years, male 196.6
GTEX-1128S-2726-SM-5H12C 60-69 years, female 192.9
GTEX-11GS4-3126-SM-5A5LH 60-69 years, male 187.9
GTEX-T2IS-3026-SM-32QPM 20-29 years, female 185.6
GTEX-RNOR-2326-SM-2TF4I 50-59 years, female 185.1
GTEX-12WSD-3126-SM-5HL7P 60-69 years, female 184.7
GTEX-131XW-3126-SM-5LZUC 50-59 years, female 184.7
GTEX-NPJ8-1526-SM-2D7VU 40-49 years, male 184.7
GTEX-14A5I-2926-SM-5Q5CQ 50-59 years, female 183.9
GTEX-QVUS-2826-SM-3GADB 60-69 years, female 183.6
GTEX-12WSH-3026-SM-5CVNI 50-59 years, male 182.4
GTEX-13QIC-2926-SM-5J2NF 60-69 years, female 181.6
GTEX-13X6K-2926-SM-5Q5D5 60-69 years, female 180.3
GTEX-139T8-1026-SM-5J2MC 60-69 years, male 178.6
GTEX-12ZZZ-3026-SM-5BC67 60-69 years, male 177.9
GTEX-13FHP-3026-SM-5IJBS 50-59 years, male 177.7
GTEX-13OVJ-2826-SM-5L3GW 50-59 years, female 177.5
GTEX-ZAJG-3126-SM-5HL9J 50-59 years, female 175.7
GTEX-13S7M-3126-SM-5RQJQ 60-69 years, female 172.6
GTEX-144FL-3026-SM-5O99C 50-59 years, male 172.0
GTEX-11TTK-2926-SM-5PNYP 60-69 years, female 171.7
GTEX-1117F-3226-SM-5N9CT 60-69 years, female 166.5
GTEX-ZZPT-3026-SM-5GZXH 50-59 years, male 165.8
GTEX-13JVG-3126-SM-5L3FH 60-69 years, male 165.2
GTEX-13PL6-3126-SM-5LUAR 40-49 years, female 164.7
GTEX-11GSP-3226-SM-5986O 60-69 years, female 163.4
GTEX-111FC-3126-SM-5GZZ2 60-69 years, male 159.2
GTEX-13PVQ-3026-SM-5SI93 50-59 years, male 158.4
GTEX-UTHO-3026-SM-3GAFB 60-69 years, male 153.5
GTEX-147GR-3026-SM-5S2ML 60-69 years, male 149.0
GTEX-11WQK-3026-SM-5EQL6 50-59 years, male 148.3
GTEX-NPJ7-2726-SM-2I3FT 60-69 years, female 147.4
GTEX-OXRN-2426-SM-2I5EQ 50-59 years, male 144.5
GTEX-T5JC-2426-SM-3NMDB 20-29 years, male 143.8
GTEX-PWO3-0926-SM-2I5EY 60-69 years, female 141.5
GTEX-N7MT-1126-SM-5SI7V 60-69 years, female 140.2
GTEX-13OW7-3026-SM-5L3GY 50-59 years, male 139.8
GTEX-PVOW-2526-SM-2XCF7 40-49 years, male 131.1
GTEX-12WSA-2926-SM-5EQ4D 60-69 years, male 129.2
GTEX-13G51-3026-SM-5IJB8 60-69 years, male 128.3
GTEX-13IVO-2926-SM-5L3CZ 70-79 years, male 122.1
GTEX-1445S-3026-SM-5O9BR 60-69 years, male 120.9
GTEX-11O72-2926-SM-5BC4V 40-49 years, male 117.1
GTEX-TSE9-3026-SM-3DB76 60-69 years, female 114.2
GTEX-QDT8-2926-SM-32PKC 30-39 years, female 110.0
GTEX-QMR6-1426-SM-32PLA 50-59 years, male 105.1
Show all
Brain - Frontal Cortex (BA9)
RPKM: 225.0
Samples: 108

Max RPKM: 395.8
Min RPKM: 75.3
Std RPKM: 60.8
Median RPKM: 231.5
GTEX-13NYS-0011-R10a-SM-5MR4S 60-69 years, male 395.8
GTEX-12ZZY-0011-R10b-SM-5HL7W 60-69 years, male 370.0
GTEX-13O3O-0011-R10a-SM-5LUA9 60-69 years, female 354.3
GTEX-13SLX-0011-R10a-SM-5P9HV 50-59 years, female 343.0
GTEX-12WSC-0011-R10a-SM-5GU57 50-59 years, male 341.1
GTEX-12WSD-0011-R10b-SM-5GU79 60-69 years, female 325.5
GTEX-14BIN-0011-R10a-SM-5S2UA 50-59 years, female 321.3
GTEX-13OW7-0011-R10a-SM-5L3H3 50-59 years, male 315.5
GTEX-13O3Q-0011-R10b-SM-5KM39 50-59 years, male 314.5
GTEX-147GR-0011-R10b-SM-5S2UM 60-69 years, male 311.3
GTEX-13RTJ-0011-R10b-SM-5O9CW 60-69 years, male 310.2
GTEX-13X6J-0011-R10b-SM-5PNWA 50-59 years, male 308.2
GTEX-14ASI-0011-R10b-SM-5S2VZ 60-69 years, male 298.6
GTEX-13NYB-0011-R10a-SM-5KM43 40-49 years, male 297.1
GTEX-1313W-0011-R10b-SM-5DUXA 50-59 years, female 294.0
GTEX-145MG-0011-R10a-SM-5PNWG 50-59 years, male 291.5
GTEX-12WSE-0011-R10b-SM-5P9JV 20-29 years, male 284.1
GTEX-12ZZZ-0011-R10a-SM-5P9HC 60-69 years, male 281.5
GTEX-13FXS-0011-R10a-SM-5J2MA 50-59 years, male 280.5
GTEX-12WSF-0011-R10a-SM-5LZVH 70-79 years, male 276.5
GTEX-132Q8-0011-R10b-SM-5DUWZ 60-69 years, male 272.9
GTEX-ZVZQ-0011-R10b-SM-51MRT 60-69 years, female 268.5
GTEX-Y8DK-0011-R10A-SM-4SOK1 60-69 years, male 265.5
GTEX-145MH-0011-R10b-SM-5PNUK 50-59 years, male 263.9
GTEX-13JUV-0011-R10b-SM-5LZXR 40-49 years, female 263.3
GTEX-N7MS-0011-R10A-SM-2HMJK 60-69 years, male 262.2
GTEX-X585-0011-R10A-SM-46MUY 50-59 years, male 261.1
GTEX-13N1W-0011-R10b-SM-5MR4H 70-79 years, male 259.3
GTEX-ZF28-0011-R10a-SM-4WWEH 60-69 years, male 258.7
GTEX-ZUA1-0011-R10a-SM-51MT6 40-49 years, male 256.8
GTEX-131YS-0011-R10b-SM-5EQ5N 60-69 years, female 255.5
GTEX-YJ89-0011-R10a-SM-4SOK9 60-69 years, male 252.1
GTEX-139TS-0011-R10a-SM-5K7TU 60-69 years, male 249.6
GTEX-NL3H-0011-R10A-SM-2I3E9 60-69 years, male 249.2
GTEX-13X6I-0011-R10a-SM-5PNWI 60-69 years, male 248.8
GTEX-N7MT-0011-R10A-SM-2I3E1 60-69 years, female 246.7
GTEX-13S7M-0011-R10b-SM-5PNZB 60-69 years, female 246.2
GTEX-13OW6-0011-R10a-SM-5L3HE 50-59 years, male 245.8
GTEX-13OVL-0011-R10a-SM-5L3GS 50-59 years, male 242.1
GTEX-131XH-0011-R10a-SM-5EGLJ 50-59 years, male 241.0
GTEX-13OW8-0011-R10a-SM-5L3H6 60-69 years, male 240.4
GTEX-T6MN-0011-R10A-SM-32QP7 50-59 years, male 238.5
GTEX-13CZV-0011-R10b-SM-5LZYD 60-69 years, male 238.3
GTEX-12WSM-0011-R10a-SM-5DUWV 60-69 years, male 236.5
GTEX-11H98-0011-R10b-SM-5NQ98 50-59 years, male 235.7
GTEX-12ZZX-0011-R10b-SM-5DUWK 40-49 years, female 234.6
GTEX-13QIC-0011-R10a-SM-5O9C7 60-69 years, female 234.1
GTEX-13X6K-0011-R10a-SM-5P9JR 60-69 years, female 233.9
GTEX-Z93S-0011-R10a-SM-4RGNM 50-59 years, male 233.5
GTEX-145LS-0011-R10a-SM-5PNUQ 60-69 years, female 233.2
GTEX-WZTO-0011-R10B-SM-4E3KB 40-49 years, male 233.1
GTEX-XLM4-0011-R10A-SM-4AT5P 60-69 years, male 232.8
GTEX-13FLW-0011-R10b-SM-5LZZF 50-59 years, male 232.4
GTEX-ZAB4-0011-R10a-SM-4SOKH 40-49 years, male 231.7
GTEX-WVLH-0011-R10A-SM-3MJFM 50-59 years, male 231.3
GTEX-NPJ8-0011-R10A-SM-2YUMO 40-49 years, male 227.6
GTEX-WL46-0011-R10A-SM-3MJFQ 50-59 years, male 225.8
GTEX-X4XX-0011-R10B-SM-46MWO 60-69 years, male 223.7
GTEX-147F4-0011-R10b-SM-5S2WC 50-59 years, male 222.1
GTEX-ZDXO-0011-R10a-SM-4WWD8 60-69 years, male 220.4
GTEX-YFC4-0011-R10a-SM-4SOK5 40-49 years, female 219.6
GTEX-12WSH-0011-R10a-SM-5LZUS 50-59 years, male 217.4
GTEX-13G51-0011-R10b-SM-5LZYF 60-69 years, male 217.1
GTEX-ZVT3-0011-R10b-SM-57WB6 60-69 years, female 216.5
GTEX-12ZZW-0011-R10b-SM-5HL9X 50-59 years, male 213.1
GTEX-13FHO-0011-R10b-SM-5J2MM 60-69 years, male 212.5
GTEX-13SLW-0011-R10a-SM-5S2UI 70-79 years, male 211.2
GTEX-X4EP-0011-R10B-SM-4QASJ 60-69 years, female 210.7
GTEX-14BIL-0011-R10a-SM-5SI75 50-59 years, male 209.8
GTEX-Q2AG-0011-R10A-SM-2HMLA 40-49 years, female 209.3
GTEX-WWYW-0011-R10A-SM-3NB35 50-59 years, female 206.4
GTEX-13QJC-0011-R10a-SM-5SI63 60-69 years, female 206.3
GTEX-145LU-0011-R10a-SM-5PNWJ 50-59 years, male 200.7
GTEX-11WQC-0011-R10a-SM-57WCT 60-69 years, male 195.7
GTEX-12126-0011-R10b-SM-5BC6T 20-29 years, male 191.7
GTEX-QVJO-0011-R10A-SM-2S1QJ 60-69 years, female 190.0
GTEX-13FTZ-0011-R10b-SM-5KLZS 60-69 years, male 188.2
GTEX-13FLV-0011-R10b-SM-5LZZ2 50-59 years, male 187.9
GTEX-NL4W-0011-R10A-SM-2I3DY 50-59 years, male 186.0
GTEX-RVPU-0011-R10A-SM-2XCAH 50-59 years, male 184.3
GTEX-S7SE-0011-R10A-SM-2XCDF 50-59 years, male 183.6
GTEX-ZXG5-0011-R10a-SM-57WDD 60-69 years, male 181.9
GTEX-12WSA-0011-R10b-SM-5P9ET 60-69 years, male 181.1
GTEX-13OVJ-0011-R10b-SM-5L3HT 50-59 years, female 178.8
GTEX-13JVG-0011-R10b-SM-5KM2P 60-69 years, male 178.6
GTEX-NPJ7-0011-R10A-SM-2I3E5 60-69 years, female 176.1
GTEX-11ZUS-0011-R10b-SM-5BC79 30-39 years, male 167.7
GTEX-13N2G-0011-R10a-SM-5MR34 60-69 years, male 165.0
GTEX-11GSP-0011-R10a-SM-5NQ7J 60-69 years, female 162.9
GTEX-1477Z-0011-R10b-SM-5S2RF 60-69 years, male 161.5
GTEX-11WQK-0011-R10a-SM-5BC6R 50-59 years, male 159.8
GTEX-XMD1-0011-R10A-SM-4AT4A 60-69 years, male 157.2
GTEX-13NZA-0011-R10b-SM-5KM54 60-69 years, male 157.1
GTEX-ZE7O-0011-R10a-SM-57WAZ 50-59 years, female 147.8
GTEX-TSE9-0011-R10A-SM-3DB7O 60-69 years, female 146.8
GTEX-ZV68-0011-R10a-SM-51MT7 50-59 years, female 143.4
GTEX-OXRN-0011-R10A-SM-2I5GC 50-59 years, male 141.7
GTEX-P44H-0011-R10A-SM-2XCEK 40-49 years, male 140.0
GTEX-1445S-0011-R10a-SM-5PNWB 60-69 years, male 139.7
GTEX-T5JC-0011-R10A-SM-32PM2 20-29 years, male 139.0
GTEX-131XW-0011-R10a-SM-5DUVA 50-59 years, female 137.7
GTEX-QVUS-0011-R10A-SM-3GIK3 60-69 years, female 136.2
GTEX-X261-0011-R10B-SM-4E3JT 50-59 years, male 133.7
GTEX-QMR6-0011-R10A-SM-32PKO 50-59 years, male 128.6
GTEX-14753-0011-R10b-SM-5S2WE 60-69 years, male 121.5
GTEX-OXRO-0011-R10A-SM-2I5EH 60-69 years, female 116.0
GTEX-13IVO-0011-R10a-SM-5LZY3 70-79 years, male 98.9
GTEX-QDT8-0011-R10A-SM-32PKG 30-39 years, female 75.3
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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