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CD68
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    TISSUE

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    CELL

  • PATHOLOGY

TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:7.3RPKM
FANTOM5:109.0Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Not detected
 

Antibody staining

Antibody HPA048982

 

Antibody CAB000051

 

Antibody CAB000066

 

Antibody CAB072861

 

Antibody CAB072862

 

Glial cells

Not detected   Medium   Not detected   Not detected   Not detected  

Neuronal cells

Not detected   Not detected   Not detected   Not detected   Not detected  
         
         
         

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

7.3

GTEx sample id

Sample description

RPKM

Brain - Caudate (basal ganglia)
RPKM: 7.3
Samples: 117

Max RPKM: 36.1
Min RPKM: 0.8
Std RPKM: 6.2
Median RPKM: 5.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 36.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 30.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 26.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 24.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 23.6
GTEX-WHSE-0011-R5A-SM-3P5ZO 20-29 years, male 20.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 19.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 18.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 18.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 18.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 18.1
GTEX-12WSB-0011-R5b-SM-5GU67 60-69 years, female 17.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 16.9
GTEX-OHPN-0011-R5A-SM-2I5FF 60-69 years, female 14.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 13.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 12.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 12.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 11.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 11.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 10.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 10.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 10.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 10.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 10.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 10.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 9.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 9.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 8.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 8.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 8.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 8.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 8.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 8.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 8.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 7.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 7.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 7.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 7.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 7.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 7.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 7.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 6.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 6.8
GTEX-RVPU-0011-R5A-SM-2XCAD 50-59 years, male 6.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 6.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 6.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 6.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 6.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 6.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 6.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 6.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 6.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 5.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 5.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 5.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 5.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 5.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 5.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 5.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 5.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 4.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 4.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 4.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 4.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 4.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 4.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 4.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 4.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 4.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 4.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 4.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 4.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 4.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 3.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 3.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 3.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 3.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 3.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 3.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 3.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 3.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 3.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 3.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 3.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 3.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 3.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 3.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 3.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 3.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 3.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 3.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 2.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 2.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 2.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 2.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 2.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 2.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 2.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 2.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 2.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 2.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 2.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 2.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 2.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 2.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 2.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 2.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 2.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 2.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 1.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 1.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 1.8
GTEX-XOTO-0011-R5A-SM-4B657 50-59 years, male 1.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 1.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 1.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 1.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 0.8
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

109.0

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 122.6
FF:10164-103B2 76 years, female 122.6

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The Human Protein Atlas project is funded
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