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TNNI2

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:1.0TPM
GTEx:0.8RPKM
FANTOM5:0.7Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA055938

  

Antibody CAB018697

  

Endothelial cells

 Not detected   Not detected  

Glandular cells

 Low   Not detected  

Peripheral nerve/ganglion

 Not detected   Not detected  
   
   

COLON - HPA RNA-seq

Average TPM

1.0
overview Male, age 54 Sample 1
TPM: 0.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 0.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 1.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 1.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 3.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 0
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 0.7
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 0.4
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 0.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 0.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 0.8
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

0.8

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 0.8
Samples: 149

Max RPKM: 10.6
Min RPKM: 0.0
Std RPKM: 1.0
Median RPKM: 0.6
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 10.6
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 7.1
GTEX-11ONC-1926-SM-5GU75 60-69 years, male 2.6
GTEX-13N2G-2226-SM-5IJCU 60-69 years, male 2.3
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 2.2
GTEX-ZZ64-0826-SM-5E449 20-29 years, male 2.2
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 1.9
GTEX-ZYT6-2826-SM-5GICX 30-39 years, male 1.9
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 1.6
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 1.5
Show all
Colon - Transverse
RPKM: 0.7
Samples: 196

Max RPKM: 15.9
Min RPKM: 0.1
Std RPKM: 1.1
Median RPKM: 0.6
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 15.9
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 2.7
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 2.2
GTEX-QEL4-1926-SM-4R1JI 50-59 years, male 2.1
GTEX-VJYA-2026-SM-4KL1K 60-69 years, male 1.9
GTEX-QV31-0826-SM-4R1KR 30-39 years, male 1.8
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 1.7
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 1.7
GTEX-Y3I4-1426-SM-4TT9C 50-59 years, male 1.7
GTEX-OXRL-1426-SM-3NM9E 50-59 years, male 1.6
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

0.7

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 0.7
FF:10014-101C5 62,83,84 years, mixed 0.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.