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ATPIF1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:238.0TPM
GTEx:33.7RPKM
FANTOM5:403.1Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:High
 

Antibody staining

Antibody HPA027999

  

Endothelial cells

 Medium  

Glandular cells

 High  

Peripheral nerve/ganglion

 High  
 
 

COLON - HPA RNA-seq

Average TPM

238.0
overview Male, age 54 Sample 1
TPM: 364.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 304.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 443.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 488.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 180.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 160.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 168.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 160
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 132.4
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 185.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 143.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 205.5
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 156.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

33.7

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 20.0
Samples: 149

Max RPKM: 34.8
Min RPKM: 8.0
Std RPKM: 5.4
Median RPKM: 19.1
GTEX-V955-1726-SM-4JBHF 60-69 years, male 34.8
GTEX-YJ8O-1426-SM-5PNV9 40-49 years, female 34.1
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 32.9
GTEX-11ONC-1926-SM-5GU75 60-69 years, male 32.0
GTEX-14A5I-2426-SM-5Q5CP 50-59 years, female 31.1
GTEX-11DXY-2026-SM-5N9CZ 60-69 years, male 30.2
GTEX-12ZZY-2726-SM-5EQ45 60-69 years, male 29.9
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 29.6
GTEX-1212Z-1826-SM-5FQSH 60-69 years, male 29.5
GTEX-13CF2-1826-SM-5N9GK 60-69 years, male 29.3
Show all
Colon - Transverse
RPKM: 44.1
Samples: 196

Max RPKM: 107.5
Min RPKM: 8.8
Std RPKM: 20.0
Median RPKM: 47.6
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 107.5
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 85.8
GTEX-139TS-1926-SM-5IJFO 60-69 years, male 85.6
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 85.4
GTEX-T5JW-1126-SM-4DM5V 20-29 years, female 81.1
GTEX-Y3IK-1826-SM-4WWDS 50-59 years, female 78.4
GTEX-ZF2S-1926-SM-4WWAN 50-59 years, female 76.3
GTEX-13O21-2426-SM-5MR4A 50-59 years, male 75.3
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 72.9
GTEX-XMK1-1726-SM-4B64Z 40-49 years, male 72.0
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

403.1

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 403.1
FF:10014-101C5 62,83,84 years, mixed 403.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.