Tissue expression of RBM39 - Staining in esophagus

ESOPHAGUS - Expression summary

Protein expression

RNA expression

HPA:	59.5	TPM
GTEx:	41.7	RPKM
FANTOM5:	212.0	Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:

Low

Antibody staining	Antibody HPA001591
Squamous epithelial cells	Low

ESOPHAGUS - HPA RNA-seq

Average TPM	59.5

Female, age 70

Sample 1
TPM: 56.9

Cell types%

Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45

Male, age 38

Sample 2
TPM: 59

Cell types%

Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20

Male, age 76

Sample 3
TPM: 62.7

Cell types%

Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM	41.7

GTEx sample id

Sample description

RPKM

Esophagus - Mucosa
RPKM: 41.7

Samples: 286

Max RPKM: 75.7
Min RPKM: 19.3
Std RPKM: 8.5
Median RPKM: 40.6

GTEX-ZZPT-1426-SM-5N9C5

50-59 years, male

75.7

GTEX-X585-1226-SM-46MW7

50-59 years, male

73.2

GTEX-13OVJ-1226-SM-5L3HA

50-59 years, female

66.1

GTEX-P78B-1026-SM-3NMC4

40-49 years, female

64.7

GTEX-11DYG-1326-SM-5N9DO

60-69 years, male

63.0

GTEX-ZF3C-1626-SM-4WWB4

50-59 years, female

63.0

GTEX-12WSA-1426-SM-5EGJU

60-69 years, male

61.8

GTEX-ZVE2-1326-SM-5NQ94

50-59 years, male

61.4

GTEX-R45C-1226-SM-48FEE

60-69 years, female

60.2

GTEX-XLM4-2326-SM-4TT2D

60-69 years, male

59.9

Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million	212.0

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 212.0

FF:10015-101C6

68,74,75 years, mixed

212.0