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NFATC1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:2.4TPM
GTEx:3.4RPKM
FANTOM5:15.5Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody CAB004513

  

Endothelial cells

 Not detected  

Glandular cells

 Not detected  

Peripheral nerve/ganglion

 Not detected  
 
 
 

COLON - HPA RNA-seq

Average TPM

2.4
overview Male, age 54 Sample 1
TPM: 1.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 1.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 4.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 2.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 3.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 1.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 0.9
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 3.5
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 2.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 1.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 2.6
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 2.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

3.4

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 4.5
Samples: 149

Max RPKM: 12.3
Min RPKM: 1.8
Std RPKM: 1.5
Median RPKM: 4.3
GTEX-11ZTS-1526-SM-5N9G7 60-69 years, female 12.3
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 12.1
GTEX-14C5O-2626-SM-5RQI5 60-69 years, male 9.2
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 9.2
GTEX-YECK-2826-SM-5IFHF 60-69 years, male 8.6
GTEX-ZLFU-1426-SM-4WWEU 40-49 years, male 7.8
GTEX-ZVZQ-2626-SM-59HLB 60-69 years, female 7.7
GTEX-ZYT6-2826-SM-5GICX 30-39 years, male 7.1
GTEX-14C39-1626-SM-5S2P4 40-49 years, male 6.6
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 6.4
Show all
Colon - Transverse
RPKM: 2.6
Samples: 196

Max RPKM: 11.4
Min RPKM: 0.2
Std RPKM: 1.6
Median RPKM: 2.1
GTEX-14ICL-1226-SM-5S2RD 30-39 years, male 11.4
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 9.6
GTEX-Z93S-2426-SM-5HL8N 50-59 years, male 8.0
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 6.2
GTEX-111VG-2226-SM-5N9DU 60-69 years, male 6.0
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 6.0
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 5.8
GTEX-Y3I4-1426-SM-4TT9C 50-59 years, male 5.8
GTEX-11ONC-2026-SM-5HL61 60-69 years, male 5.7
GTEX-145LS-2726-SM-5Q5D8 60-69 years, female 5.6
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

15.5

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 15.5
FF:10014-101C5 62,83,84 years, mixed 15.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.