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AOC3

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:50.7TPM
GTEx:79.6RPKM
FANTOM5:131.4Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA000980

  

Antibody CAB025797

  

Endothelial cells

 Medium   High  

Glandular cells

 Medium   Not detected  

Peripheral nerve/ganglion

 Not detected   Not detected  
   
   
   

COLON - HPA RNA-seq

Average TPM

50.7
overview Male, age 54 Sample 1
TPM: 33.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 30.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 16
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 51.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 27.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 175.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 25.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 17.4
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 88.2
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 16.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 40.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 80.5
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 57.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

79.6

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 115.9
Samples: 149

Max RPKM: 215.6
Min RPKM: 47.9
Std RPKM: 32.1
Median RPKM: 115.5
GTEX-11ZTT-1626-SM-5EQKR 60-69 years, female 215.6
GTEX-11DXZ-1626-SM-5GIDI 50-59 years, male 192.6
GTEX-1399R-2126-SM-5K7WZ 30-39 years, male 192.1
GTEX-13G51-2126-SM-5IJD9 60-69 years, male 188.7
GTEX-13CF2-1826-SM-5N9GK 60-69 years, male 174.8
GTEX-14E6E-1726-SM-5S2R6 30-39 years, male 168.9
GTEX-11GS4-1826-SM-5HL4T 60-69 years, male 165.3
GTEX-ZA64-1426-SM-5CVMC 20-29 years, male 165.3
GTEX-11P7K-1826-SM-5HL5A 30-39 years, male 162.9
GTEX-11EM3-1626-SM-5N9CO 20-29 years, female 162.6
Show all
Colon - Transverse
RPKM: 52.0
Samples: 196

Max RPKM: 183.9
Min RPKM: 3.0
Std RPKM: 45.4
Median RPKM: 35.4
GTEX-11ZVC-2126-SM-5EGJ1 50-59 years, female 183.9
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 177.2
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 163.8
GTEX-11GSP-1626-SM-5986N 60-69 years, female 163.2
GTEX-TKQ1-0626-SM-4DXTS 30-39 years, male 162.1
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 153.0
GTEX-Y8LW-1226-SM-4WWDP 50-59 years, female 146.8
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 142.0
GTEX-ZYFC-2626-SM-5NQ6S 50-59 years, male 141.3
GTEX-SNMC-1126-SM-4DM5M 20-29 years, male 136.7
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

131.4

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 131.4
FF:10014-101C5 62,83,84 years, mixed 131.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.