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PPP1R1B

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:213.5TPM
GTEx:51.4RPKM
FANTOM5:140.4Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:High
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA048630

  

Antibody HPA061142

  

Antibody CAB004026

  

Endothelial cells

 High   Not detected   Not detected  

Glandular cells

 Medium   Medium   High  

Peripheral nerve/ganglion

 Medium   Low  
     
     
     

COLON - HPA RNA-seq

Average TPM

213.5
overview Male, age 54 Sample 1
TPM: 198.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 181.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 173.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 177.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 57.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 207.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 352.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 267.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 154.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 378.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 239.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 233.6
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 153.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

51.4

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 6.5
Samples: 149

Max RPKM: 36.6
Min RPKM: 0.0
Std RPKM: 5.7
Median RPKM: 4.8
GTEX-Y5LM-1426-SM-5RQJL 40-49 years, female 36.6
GTEX-V955-1726-SM-4JBHF 60-69 years, male 29.3
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 28.8
GTEX-XBED-1726-SM-47JYO 60-69 years, male 27.9
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 26.0
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 22.9
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 20.9
GTEX-11EQ9-1526-SM-5PNY7 30-39 years, male 17.2
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 16.2
GTEX-ZVT4-2626-SM-5N9GJ 50-59 years, female 16.2
Show all
Colon - Transverse
RPKM: 85.6
Samples: 196

Max RPKM: 225.7
Min RPKM: 1.6
Std RPKM: 61.6
Median RPKM: 88.3
GTEX-T5JW-1126-SM-4DM5V 20-29 years, female 225.7
GTEX-S4Q7-0826-SM-4AD5E 20-29 years, male 208.2
GTEX-WFON-1426-SM-4LVMT 40-49 years, male 205.8
GTEX-Y9LG-1526-SM-4WWDR 30-39 years, male 197.1
GTEX-WOFM-2026-SM-4OOSQ 20-29 years, male 194.0
GTEX-YF7O-1726-SM-5IFJ9 50-59 years, male 191.4
GTEX-XPVG-1826-SM-4B64X 50-59 years, male 186.7
GTEX-1211K-1726-SM-5FQUJ 60-69 years, female 185.0
GTEX-PWN1-1426-SM-48TDF 40-49 years, female 183.2
GTEX-XUJ4-2026-SM-4BOOW 60-69 years, female 182.9
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

140.4

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 140.4
FF:10014-101C5 62,83,84 years, mixed 140.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.