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PDHA1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:111.1TPM
GTEx:27.4RPKM
FANTOM5:85.4Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA047487

  

Antibody HPA047864

  

Antibody HPA063053

  

Endothelial cells

 Low   Not detected   Low  

Glandular cells

 Low   Medium   Medium  

Peripheral nerve/ganglion

 Not detected   Not detected   Medium  
     
     
     

COLON - HPA RNA-seq

Average TPM

111.1
overview Male, age 54 Sample 1
TPM: 71.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 83.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 130
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 109.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 57.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 114.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 154.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 123.2
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 100.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 157.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 117.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 128.8
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 96.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

27.4

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 18.4
Samples: 149

Max RPKM: 28.4
Min RPKM: 7.8
Std RPKM: 3.6
Median RPKM: 18.3
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 28.4
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 26.9
GTEX-XBED-1726-SM-47JYO 60-69 years, male 26.9
GTEX-145ME-1126-SM-5SIAT 40-49 years, female 26.7
GTEX-XUW1-1826-SM-4BOQD 50-59 years, female 24.8
GTEX-ZPIC-2626-SM-57WE2 40-49 years, female 24.6
GTEX-14E6E-1726-SM-5S2R6 30-39 years, male 24.5
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 24.5
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 24.2
GTEX-117YX-0526-SM-5EGJH 50-59 years, male 24.1
Show all
Colon - Transverse
RPKM: 34.2
Samples: 196

Max RPKM: 61.4
Min RPKM: 9.6
Std RPKM: 12.3
Median RPKM: 37.3
GTEX-145MN-1726-SM-5SIA6 30-39 years, male 61.4
GTEX-T5JW-1126-SM-4DM5V 20-29 years, female 58.6
GTEX-YF7O-1726-SM-5IFJ9 50-59 years, male 57.6
GTEX-XUJ4-2026-SM-4BOOW 60-69 years, female 55.4
GTEX-WFG7-1526-SM-4LVMG 20-29 years, male 54.8
GTEX-U4B1-1126-SM-4DXV3 40-49 years, male 54.0
GTEX-11EM3-1526-SM-5A5KN 20-29 years, female 53.7
GTEX-11I78-1226-SM-5A5K6 50-59 years, female 53.2
GTEX-ZPIC-2226-SM-57WDX 40-49 years, female 53.1
GTEX-13O21-2426-SM-5MR4A 50-59 years, male 52.9
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

85.4

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 85.4
FF:10014-101C5 62,83,84 years, mixed 85.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.