Fields »
ABOUT
HELP
BLOG
VPS4A

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:15.6TPM
GTEx:42.9RPKM
FANTOM5:99.4Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Not detected
Peripheral nerve:Not available
Chondrocytes:Low
 
 

Antibody staining

Antibody CAB018751

  

Antibody CAB034411

  

Adipocytes

 Medium  

Fibroblasts

 Medium   Not detected  

Peripheral nerve

 Low  

Chondrocytes

 Low  
      
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not available
Peripheral nerve:Medium
 
 

Antibody staining

Antibody CAB018751

  

Antibody CAB034411

  

Adipocytes

 Low   Not detected  

Fibroblasts

 Low  

Peripheral nerve

 Low   Medium  
      
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

15.6
N/A Female, age 80 Sample 1
TPM: 19.9
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 14.2
N/A Female, age 57 Sample 3
TPM: 12.1
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 17.8
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 14
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

42.9

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 44.8
Samples: 350

Max RPKM: 68.0
Min RPKM: 29.5
Std RPKM: 6.8
Median RPKM: 44.3
GTEX-X15G-2326-SM-4PQZS 50-59 years, female 68.0
GTEX-OXRO-0226-SM-3LK6F 60-69 years, female 63.4
GTEX-X8HC-0226-SM-4E3K1 50-59 years, female 62.8
GTEX-R55G-2426-SM-2TC5I 40-49 years, female 62.7
GTEX-S7SF-1826-SM-3K2AD 20-29 years, female 62.6
GTEX-13RTJ-2526-SM-5S2Q3 60-69 years, male 62.3
GTEX-11EMC-2826-SM-5PNY6 60-69 years, female 61.6
GTEX-ZYFD-0226-SM-5NQ86 50-59 years, male 61.2
GTEX-XUJ4-2526-SM-4BOO4 60-69 years, female 60.1
GTEX-S341-1626-SM-3K2B8 40-49 years, female 59.4
Show all
Adipose - Visceral (Omentum)
RPKM: 40.0
Samples: 227

Max RPKM: 67.9
Min RPKM: 25.7
Std RPKM: 6.6
Median RPKM: 39.4
GTEX-1122O-0926-SM-5N9C9 60-69 years, female 67.9
GTEX-Y5LM-0826-SM-4VDSW 40-49 years, female 65.9
GTEX-13IVO-2426-SM-5K7V9 70-79 years, male 54.1
GTEX-1399S-1426-SM-5PNYQ 30-39 years, female 53.9
GTEX-11I78-0226-SM-5HL6R 50-59 years, female 53.5
GTEX-Y114-1326-SM-4TT9A 50-59 years, female 53.2
GTEX-ZYVF-1026-SM-5E44V 50-59 years, female 52.9
GTEX-11EQ9-1126-SM-5987I 30-39 years, male 52.6
GTEX-12696-1826-SM-5EGJS 60-69 years, male 52.6
GTEX-ZYT6-2126-SM-5GZZ4 30-39 years, male 51.3
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

99.4

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 99.4
FF:10010-101C1 65,65,76 years, mixed 99.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.