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VPS4A

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:13.4TPM
GTEx:44.2RPKM
FANTOM5:123.4Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody CAB018751

  

Antibody CAB034411

  

Endothelial cells

 Medium   Low  

Glandular cells

 High   High  

Peripheral nerve/ganglion

 Not detected   Not detected  
   
   
   

COLON - HPA RNA-seq

Average TPM

13.4
overview Male, age 54 Sample 1
TPM: 15.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 12.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 11.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 15.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 7.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 13.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 14.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 14.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 11.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 15.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 14.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 16.1
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 10
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

44.2

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 47.6
Samples: 149

Max RPKM: 75.9
Min RPKM: 32.7
Std RPKM: 7.0
Median RPKM: 46.9
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 75.9
GTEX-11TUW-2326-SM-5EQMO 60-69 years, male 71.6
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 67.3
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 64.6
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 62.4
GTEX-ZTTD-2626-SM-57WEX 50-59 years, male 61.7
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 59.9
GTEX-13PVQ-2726-SM-5L3H7 50-59 years, male 59.8
GTEX-14C5O-2626-SM-5RQI5 60-69 years, male 58.6
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 58.2
Show all
Colon - Transverse
RPKM: 41.7
Samples: 196

Max RPKM: 67.6
Min RPKM: 20.8
Std RPKM: 5.4
Median RPKM: 41.0
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 67.6
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 63.1
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 61.3
GTEX-WQUQ-2526-SM-4MVNO 60-69 years, male 54.3
GTEX-13U4I-2426-SM-5LU34 40-49 years, female 53.5
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 53.1
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 52.7
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 52.6
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 52.3
GTEX-QMRM-1226-SM-447C6 50-59 years, male 51.7
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

123.4

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 123.4
FF:10014-101C5 62,83,84 years, mixed 123.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.