Fields »
ABOUT
HELP
BLOG
LYVE1

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:155.7TPM
GTEx:66.8RPKM
FANTOM5:282.4Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 
 

Antibody staining

Antibody HPA042953

  

Antibody CAB025860

  

Adipocytes

 Not detected   Not detected  

Chondrocytes

 Not detected  

Fibroblasts

 Not detected   Not detected  

Peripheral nerve

 Not detected   Not detected  
      
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
Chondrocytes:Not detected
 

Antibody staining

Antibody HPA042953

  

Antibody CAB025860

  

Adipocytes

 Not detected   Not detected  

Fibroblasts

 Not detected   Not detected  

Peripheral nerve

 Not detected   Not detected  

Chondrocytes

 Low  
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

155.7
N/A Female, age 80 Sample 1
TPM: 10.9
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 28.2
N/A Female, age 57 Sample 3
TPM: 24.1
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 326.3
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 389.1
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

66.8

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 58.4
Samples: 350

Max RPKM: 275.6
Min RPKM: 1.4
Std RPKM: 43.6
Median RPKM: 45.2
GTEX-S4Q7-1626-SM-3K2AE 20-29 years, male 275.6
GTEX-R55F-1426-SM-2TF53 50-59 years, male 255.9
GTEX-11DXX-2326-SM-5Q5A2 60-69 years, female 250.5
GTEX-14C39-2526-SM-5S2UH 40-49 years, male 208.2
GTEX-1211K-2226-SM-5FQU6 60-69 years, female 199.8
GTEX-ZVZO-0226-SM-5A5LA 40-49 years, male 187.5
GTEX-111CU-1826-SM-5GZYN 50-59 years, male 179.6
GTEX-144FL-0226-SM-5Q5D4 50-59 years, male 174.6
GTEX-ZTPG-0226-SM-5O99I 20-29 years, female 171.9
GTEX-ZDTT-2626-SM-5S2OP 60-69 years, male 164.3
Show all
Adipose - Visceral (Omentum)
RPKM: 79.7
Samples: 227

Max RPKM: 458.7
Min RPKM: 1.8
Std RPKM: 62.0
Median RPKM: 63.3
GTEX-132AR-0526-SM-5J2MJ 50-59 years, female 458.7
GTEX-146FH-2026-SM-5SI9I 50-59 years, female 347.6
GTEX-117YX-0726-SM-5GIET 50-59 years, male 312.5
GTEX-ZT9X-0926-SM-5O9C4 40-49 years, male 301.3
GTEX-13X6I-1526-SM-5SIAC 60-69 years, male 253.3
GTEX-12WSG-0426-SM-5FQSE 50-59 years, female 245.0
GTEX-Y3I4-0726-SM-4TT7M 50-59 years, male 236.3
GTEX-WY7C-0926-SM-3NB34 50-59 years, male 223.3
GTEX-ZPCL-1026-SM-5GCOX 60-69 years, female 210.6
GTEX-13N11-1826-SM-5IJDS 50-59 years, female 205.3
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

282.4

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 282.4
FF:10010-101C1 65,65,76 years, mixed 282.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.