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TRIM45

COLON - Expression summary

RNA expression
HPA:1.7TPM
GTEx:2.5RPKM
FANTOM5:2.3Tags Per Million

COLON - Annotated protein expression
 

Antibody staining

Antibody HPA030266

  

Endothelial cells

 Not detected  

Glandular cells

 Not detected  
 
 

COLON - HPA RNA-seq

Average TPM

1.7
overview Male, age 54 Sample 1
TPM: 1.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 0.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 1.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 0.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 1.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 2.2
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 2.2
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 0.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 2.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 1.8
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 2.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

2.5

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 3.4
Samples: 149

Max RPKM: 8.5
Min RPKM: 0.5
Std RPKM: 1.9
Median RPKM: 2.9
GTEX-13OW8-2726-SM-5L3FZ 60-69 years, male 8.5
GTEX-11ONC-1926-SM-5GU75 60-69 years, male 7.7
GTEX-13U4I-2626-SM-5SI9C 40-49 years, female 7.4
GTEX-11EMC-1426-SM-5N9E4 60-69 years, female 7.3
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 7.3
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 7.3
GTEX-YJ8O-1426-SM-5PNV9 40-49 years, female 7.3
GTEX-YECK-2826-SM-5IFHF 60-69 years, male 7.2
GTEX-11ZTS-1526-SM-5N9G7 60-69 years, female 7.1
GTEX-147JS-2626-SM-5S2UX 60-69 years, male 7.1
Show all
Colon - Transverse
RPKM: 1.9
Samples: 196

Max RPKM: 8.0
Min RPKM: 0.4
Std RPKM: 1.2
Median RPKM: 1.5
GTEX-ZYFC-2626-SM-5NQ6S 50-59 years, male 8.0
GTEX-11GSP-1626-SM-5986N 60-69 years, female 7.3
GTEX-Z93S-2426-SM-5HL8N 50-59 years, male 6.4
GTEX-13FHP-2426-SM-5KLZ5 50-59 years, male 6.3
GTEX-145MO-2426-SM-5NQ9W 60-69 years, male 6.3
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 5.9
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 5.0
GTEX-11ZVC-2126-SM-5EGJ1 50-59 years, female 4.8
GTEX-P78B-1726-SM-3P5ZV 40-49 years, female 4.7
GTEX-ZAB4-2226-SM-5HL97 40-49 years, male 4.5
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

2.3

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 2.3
FF:10014-101C5 62,83,84 years, mixed 2.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.