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PIGC

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:14.6TPM
GTEx:4.3RPKM
FANTOM5:16.9Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA036663

  

Adipocytes

 Not detected  

Chondrocytes

 Not detected  

Fibroblasts

 Not detected  

Peripheral nerve

 Not detected  
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Not detected
Fibroblasts:Not detected
 
 

Antibody staining

Antibody HPA036663

  

Adipocytes

 Not detected  

Chondrocytes

 Not detected  

Fibroblasts

 Not detected  
    
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

14.6
N/A Female, age 80 Sample 1
TPM: 13.2
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 14.5
N/A Female, age 57 Sample 3
TPM: 13.4
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 16.6
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 15.5
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

4.3

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 4.6
Samples: 350

Max RPKM: 7.0
Min RPKM: 2.0
Std RPKM: 0.7
Median RPKM: 4.6
GTEX-14BMV-0226-SM-5S2N2 50-59 years, male 7.0
GTEX-Y5V6-2526-SM-5IFJV 60-69 years, male 6.7
GTEX-11EMC-2826-SM-5PNY6 60-69 years, female 6.6
GTEX-XBEC-0326-SM-4AT4M 50-59 years, male 6.6
GTEX-13G51-2626-SM-5LZYW 60-69 years, male 6.5
GTEX-X5EB-2426-SM-4E3HX 40-49 years, male 6.5
GTEX-1399T-2726-SM-5K7XK 60-69 years, male 6.4
GTEX-Y3I4-2226-SM-4TT7O 50-59 years, male 6.4
GTEX-Y114-2326-SM-4TT7X 50-59 years, female 6.2
GTEX-S32W-2226-SM-2XCAY 50-59 years, female 6.1
Show all
Adipose - Visceral (Omentum)
RPKM: 3.9
Samples: 227

Max RPKM: 6.1
Min RPKM: 2.0
Std RPKM: 0.8
Median RPKM: 3.8
GTEX-13NZ9-2026-SM-5KM1U 50-59 years, male 6.1
GTEX-13S7M-0826-SM-5QGQX 60-69 years, female 6.1
GTEX-13IVO-2426-SM-5K7V9 70-79 years, male 5.8
GTEX-ZUA1-2126-SM-57YRB 40-49 years, male 5.8
GTEX-11PRG-1526-SM-5HL6Z 50-59 years, male 5.7
GTEX-13O3P-0926-SM-5IFFI 50-59 years, male 5.7
GTEX-XBEC-1826-SM-4QASN 50-59 years, male 5.7
GTEX-XOT4-0826-SM-4B66Y 60-69 years, female 5.7
GTEX-11DYG-2026-SM-5EGGX 60-69 years, male 5.6
GTEX-1399T-1326-SM-5PNVH 60-69 years, male 5.5
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

16.9

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 16.9
FF:10010-101C1 65,65,76 years, mixed 16.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.