Tissue expression of CKAP4 - Staining in adipose tissue

SOFT TISSUE - Expression summary

Protein expression

RNA expression

HPA:	31.5	TPM
GTEx:	16.7	RPKM
FANTOM5:	27.9	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Low
Fibroblasts:	Medium
Peripheral nerve:	Medium
Chondrocytes:	Low

Antibody staining	Antibody HPA000278	Antibody HPA000792
Adipocytes	Medium	Not detected
Fibroblasts	Medium
Peripheral nerve	Medium
Chondrocytes	Medium

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Fibroblasts:	Medium
Adipocytes:	Low
Chondrocytes:	Low
Peripheral nerve:	Medium

Antibody staining	Antibody HPA000278	Antibody HPA000792
Fibroblasts	Medium	High
Adipocytes	Not detected
Chondrocytes	Not detected
Peripheral nerve	Medium

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	31.5

Female, age 80

Sample 1
TPM: 28.6

Cell types%

Adipocytes: 95
Other cell types: 5

Female, age 45

Sample 2
TPM: 12.5

Female, age 57

Sample 3
TPM: 11.7

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

Female, age 74

Sample 4
TPM: 63.9

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

Female, age 59

Sample 5
TPM: 40.8

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	16.7

GTEx sample id

Sample description

RPKM

Adipose - Subcutaneous
RPKM: 15.9

Samples: 350

Max RPKM: 54.8
Min RPKM: 7.7
Std RPKM: 5.9
Median RPKM: 14.5

GTEX-ZYVF-0226-SM-5GIEG

50-59 years, female

54.8

GTEX-Q734-1826-SM-2I3EL

40-49 years, female

52.7

GTEX-X4XY-0326-SM-46MVZ

60-69 years, male

44.8

GTEX-XYKS-2726-SM-4E3IC

60-69 years, female

39.0

GTEX-145MI-0426-SM-5O99V

60-69 years, female

38.6

GTEX-13PLJ-0126-SM-5L3HU

60-69 years, female

38.3

GTEX-P4PQ-0226-SM-2S1NK

60-69 years, male

33.9

GTEX-R55F-1426-SM-2TF53

50-59 years, male

33.5

GTEX-POMQ-2326-SM-5S2VS

20-29 years, female

30.8

GTEX-ZDXO-2426-SM-5S2NJ

60-69 years, male

29.0

Show all

Adipose - Visceral (Omentum)
RPKM: 17.9

Samples: 227

Max RPKM: 61.2
Min RPKM: 7.3
Std RPKM: 7.3
Median RPKM: 16.9

GTEX-1128S-0926-SM-5GZZU

60-69 years, female

61.2

GTEX-13X6H-1726-SM-5Q5EH

50-59 years, female

52.1

GTEX-ZZPU-0326-SM-5N9BJ

50-59 years, female

48.7

GTEX-ZAJG-1626-SM-5HL7I

50-59 years, female

43.0

GTEX-X8HC-2326-SM-4QAS4

50-59 years, female

36.0

GTEX-ZVZP-1126-SM-5GICU

50-59 years, male

35.9

GTEX-133LE-0926-SM-5P9J1

20-29 years, female

32.8

GTEX-U8XE-1926-SM-3DB98

30-39 years, male

31.5

GTEX-ZYVF-1026-SM-5E44V

50-59 years, female

31.1

GTEX-13O3P-0926-SM-5IFFI

50-59 years, male

30.5

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	27.9

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 27.9

FF:10010-101C1

65,65,76 years, mixed

27.9