We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • HUMAN PATHOLOGY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
SPRY2
  • TISSUE

  • premium

    CELL

  • PATHOLOGY

TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:15.0RPKM
FANTOM5:69.0Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Medium
 

Antibody staining

Antibody CAB037205

 

Glial cells

Not detected  

Neuronal cells

Medium  
 
 
 

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

15.0

GTEx sample id

Sample description

RPKM

Brain - Caudate (basal ganglia)
RPKM: 15.0
Samples: 117

Max RPKM: 37.2
Min RPKM: 3.8
Std RPKM: 4.5
Median RPKM: 14.8
GTEX-WHSE-0011-R5A-SM-3P5ZO 20-29 years, male 37.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 29.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 25.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 24.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 24.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 23.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 23.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 23.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 21.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 21.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 20.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 19.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 19.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 19.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 19.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 19.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 18.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 18.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 18.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 18.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 17.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 17.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 17.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 17.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 17.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 17.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 17.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 17.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 17.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 17.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 17.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 17.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 17.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 17.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 16.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 16.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 16.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 16.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 16.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 16.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 16.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 16.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 16.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 16.3
GTEX-12WSB-0011-R5b-SM-5GU67 60-69 years, female 16.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 16.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 16.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 16.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 15.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 15.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 15.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 15.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 15.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 15.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 15.3
GTEX-OHPN-0011-R5A-SM-2I5FF 60-69 years, female 15.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 14.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 14.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 14.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 14.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 14.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 14.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 14.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 14.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 14.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 13.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 13.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 13.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 13.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 13.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 13.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 12.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 12.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 12.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 12.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 12.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 12.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 12.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 12.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 12.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 12.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 12.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 12.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 12.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 12.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 12.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 11.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 11.8
GTEX-XOTO-0011-R5A-SM-4B657 50-59 years, male 11.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 11.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 11.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 11.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 11.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 11.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 11.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 11.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 11.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 10.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 10.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 10.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 10.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 10.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 10.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 10.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 9.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 9.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 9.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 9.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 9.4
GTEX-RVPU-0011-R5A-SM-2XCAD 50-59 years, male 9.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 9.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 9.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 9.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 9.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 8.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 8.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 3.8
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

69.0

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 79.9
FF:10164-103B2 76 years, female 79.9

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.