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RAC1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:191.9TPM
GTEx:87.7RPKM
FANTOM5:205.1Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Not available
 

Antibody staining

Antibody HPA047820

  

Antibody CAB035994

  

Endothelial cells

 Medium   Medium  

Glandular cells

 Medium   High  

Peripheral nerve/ganglion

 Medium  
   
   
   

COLON - HPA RNA-seq

Average TPM

191.9
overview Male, age 54 Sample 1
TPM: 161.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 149.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 155.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 228.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 92.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 227.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 261.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 198
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 188.5
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 253.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 217.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 209
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 151
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

87.7

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 76.9
Samples: 149

Max RPKM: 109.6
Min RPKM: 56.0
Std RPKM: 8.7
Median RPKM: 76.7
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 109.6
GTEX-12WSM-1426-SM-5GCPA 60-69 years, male 100.3
GTEX-ZVT2-1726-SM-51MRO 50-59 years, female 98.5
GTEX-ZTTD-2626-SM-57WEX 50-59 years, male 96.6
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 96.5
GTEX-ZE7O-2626-SM-51MSS 50-59 years, female 95.8
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 92.9
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 92.1
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 90.9
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 90.8
Show all
Colon - Transverse
RPKM: 96.0
Samples: 196

Max RPKM: 167.0
Min RPKM: 56.0
Std RPKM: 21.3
Median RPKM: 94.1
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 167.0
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 162.9
GTEX-111CU-1426-SM-5GZYP 50-59 years, male 161.5
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 147.5
GTEX-Y5LM-1526-SM-4VDTA 40-49 years, female 143.6
GTEX-1122O-1526-SM-5N9CL 60-69 years, female 140.6
GTEX-144GM-1226-SM-5LU52 20-29 years, male 138.9
GTEX-ZYWO-1626-SM-5E44H 40-49 years, female 137.1
GTEX-11EM3-1526-SM-5A5KN 20-29 years, female 136.1
GTEX-12BJ1-2126-SM-5BC5O 60-69 years, male 135.8
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

205.1

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 205.1
FF:10014-101C5 62,83,84 years, mixed 205.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.