We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • HUMAN PATHOLOGY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
RAC1
  • TISSUE

  • CELL

  • PATHOLOGY

TISSUE ATLAS PRIMARY DATA HIPPOCAMPUS

GENE/PROTEIN

Antibody validation


Dictionary

Hippocampus

HIPPOCAMPUS - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:112.6RPKM
FANTOM5:218.6Tags Per Million

HIPPOCAMPUS - Annotated protein expression

Annotated protein
expression

Glial cells:Low
Neuronal cells:Not detected
 

Antibody staining

Antibody HPA047820

 

Antibody CAB035994

 

Glial cells

Low   Not detected  

Neuronal cells

Not detected   Not detected  
   
   
   

HIPPOCAMPUS - HPA RNA-seq

Pending HPA RNA-seq analysis


HIPPOCAMPUS - GTEx RNA-seq

Average RPKM

112.6

GTEx sample id

Sample description

RPKM

Brain - Hippocampus
RPKM: 112.6
Samples: 94

Max RPKM: 222.1
Min RPKM: 50.8
Std RPKM: 30.4
Median RPKM: 109.5
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 222.1
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 181.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 180.6
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 167.1
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 165.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 163.5
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 162.4
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 157.4
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 155.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 154.3
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 151.6
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 150.8
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 149.1
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 147.2
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 146.1
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 139.7
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 137.5
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 136.2
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 135.9
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 134.3
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 134.3
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 134.2
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 129.8
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 129.6
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 129.6
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 128.9
GTEX-N7MT-0011-R1a-SM-5SI7S 60-69 years, female 127.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 126.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 122.5
GTEX-XOTO-0011-R1B-SM-4B65C 50-59 years, male 122.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 121.8
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 121.1
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 120.1
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 119.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 119.6
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 118.8
GTEX-13OW6-0011-R1a-SM-5L3HQ 50-59 years, male 115.5
GTEX-ZUA1-0011-R1a-SM-4YCE2 40-49 years, male 114.9
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 114.6
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 114.1
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 113.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 113.0
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 112.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 111.7
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 111.5
GTEX-13N2G-0011-R1b-SM-5MR3G 60-69 years, male 111.3
GTEX-145LS-0011-R1b-SM-5PNUP 60-69 years, female 109.8
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 109.2
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 108.6
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 107.5
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 106.8
GTEX-14ASI-0011-R1b-SM-5S2TY 60-69 years, male 106.8
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 105.9
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 105.3
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 104.3
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 104.2
GTEX-12WSB-0011-R1b-SM-5P9EY 60-69 years, female 103.2
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 101.6
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 101.6
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 100.7
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 100.2
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 100.1
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 99.8
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 98.6
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 98.4
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 98.2
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 98.1
GTEX-NPJ7-0011-R1a-SM-3GACT 60-69 years, female 96.9
GTEX-11GSO-0011-R1b-SM-57WD3 60-69 years, male 96.1
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 95.3
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 94.0
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 91.5
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 90.4
GTEX-RNOR-0011-R1A-SM-5SI8F 50-59 years, female 90.1
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 87.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 86.0
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 84.8
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 83.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 83.8
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 83.7
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 83.1
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 82.8
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 82.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 76.6
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 72.7
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 69.8
GTEX-YJ89-0011-R1a-SM-4RGLS 60-69 years, male 69.7
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 65.5
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 64.3
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 64.2
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 63.9
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 63.4
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 61.6
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 50.8
Show all

HIPPOCAMPUS - FANTOM5 CAGE

Average Tags Per Million

218.6

FANTOM5 sample id

Sample description

Tags Per Million

Hippocampus
Tags Per Million: 230.5
FF:10169-103B7 60 years, female 238.4
FF:10153-102I9 76 years, female 222.6

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.