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THBS1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:71.8TPM
GTEx:109.2RPKM
FANTOM5:234.7Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody CAB033678

  

Endothelial cells

 Medium  

Glandular cells

 High  

Peripheral nerve/ganglion

 Low  
 
 

COLON - HPA RNA-seq

Average TPM

71.8
overview Male, age 54 Sample 1
TPM: 47.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 24.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 69.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 151.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 62.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 117.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 54.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 42.5
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 98.1
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 38.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 66.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 37.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 123
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

109.2

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 135.7
Samples: 149

Max RPKM: 1058.3
Min RPKM: 6.7
Std RPKM: 194.4
Median RPKM: 54.3
GTEX-11EM3-1626-SM-5N9CO 20-29 years, female 1058.3
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 865.4
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 821.9
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 800.5
GTEX-12WSJ-1426-SM-5GCON 40-49 years, female 795.4
GTEX-XBED-1726-SM-47JYO 60-69 years, male 709.6
GTEX-14A5H-1626-SM-5SIAN 60-69 years, male 692.0
GTEX-ZA64-1426-SM-5CVMC 20-29 years, male 661.9
GTEX-WFG8-1726-SM-4LVM6 20-29 years, male 530.9
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 523.1
Show all
Colon - Transverse
RPKM: 89.2
Samples: 196

Max RPKM: 771.8
Min RPKM: 11.3
Std RPKM: 132.5
Median RPKM: 37.2
GTEX-13O61-1626-SM-5KM3T 60-69 years, male 771.8
GTEX-11EQ9-1426-SM-5987G 30-39 years, male 726.9
GTEX-13CF3-1426-SM-5K7YY 60-69 years, female 654.6
GTEX-QDVJ-1326-SM-48U1X 50-59 years, male 639.9
GTEX-12WSJ-1526-SM-5GCNI 40-49 years, female 595.1
GTEX-Y3I4-1426-SM-4TT9C 50-59 years, male 581.0
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 539.9
GTEX-TKQ1-0626-SM-4DXTS 30-39 years, male 477.9
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 380.1
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 369.3
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

234.7

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 234.7
FF:10014-101C5 62,83,84 years, mixed 234.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.