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MTTP

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:0.1TPM
GTEx:0.3RPKM
FANTOM5:315.6Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not available
 

Antibody staining

Antibody HPA054862

  

Endothelial cells

 Not detected  

Glandular cells

 Not detected  

Peripheral nerve/ganglion

 Medium  
 
 
 

COLON - HPA RNA-seq

Average TPM

0.1
overview Male, age 54 Sample 1
TPM: 0.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 0.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 0.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 0
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 0
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 0.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 0
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 0
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 0.4
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 0.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 0.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 0.1
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 0.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

0.3

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 0.7
Samples: 149

Max RPKM: 8.6
Min RPKM: 0.0
Std RPKM: 0.9
Median RPKM: 0.4
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 8.6
GTEX-11P81-1426-SM-5P9JN 30-39 years, female 3.1
GTEX-1399R-2126-SM-5K7WZ 30-39 years, male 2.9
GTEX-13CF2-1826-SM-5N9GK 60-69 years, male 2.8
GTEX-WYVS-1126-SM-4SOJX 40-49 years, female 2.2
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 2.1
GTEX-ZQG8-2426-SM-57WEE 60-69 years, female 2.1
GTEX-ZYFG-1826-SM-5GZWX 60-69 years, female 2.0
GTEX-ZYT6-2826-SM-5GICX 30-39 years, male 2.0
GTEX-13FTW-2126-SM-5K7YG 40-49 years, male 1.9
Show all
Colon - Transverse
RPKM: 0.1
Samples: 196

Max RPKM: 2.3
Min RPKM: 0.0
Std RPKM: 0.2
Median RPKM: 0.0
GTEX-13U4I-2426-SM-5LU34 40-49 years, female 2.3
GTEX-11P81-1126-SM-5GU5G 30-39 years, female 0.9
GTEX-RWS6-1826-SM-47JXX 60-69 years, female 0.8
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 0.6
GTEX-Y8LW-1226-SM-4WWDP 50-59 years, female 0.6
GTEX-11NSD-1626-SM-5986U 20-29 years, male 0.5
GTEX-O5YW-1426-SM-3MJHF 50-59 years, male 0.5
GTEX-RU1J-1326-SM-46MUL 20-29 years, female 0.5
GTEX-111YS-1626-SM-5GZZ9 60-69 years, male 0.4
GTEX-SNMC-1126-SM-4DM5M 20-29 years, male 0.4
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

315.6

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 315.6
FF:10014-101C5 62,83,84 years, mixed 315.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.