Tissue expression of COPS3 - Staining in esophagus

ESOPHAGUS - Expression summary

Protein expression

RNA expression

HPA:	45.0	TPM
GTEx:	22.6	RPKM
FANTOM5:	45.1	Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:

High

Antibody staining	Antibody HPA021997
Squamous epithelial cells	High

ESOPHAGUS - HPA RNA-seq

Average TPM	45.0

Female, age 70

Sample 1
TPM: 42.1

Cell types%

Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45

Male, age 38

Sample 2
TPM: 47.1

Cell types%

Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20

Male, age 76

Sample 3
TPM: 45.7

Cell types%

Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM	22.6

GTEx sample id

Sample description

RPKM

Esophagus - Mucosa
RPKM: 22.6

Samples: 286

Max RPKM: 40.0
Min RPKM: 9.9
Std RPKM: 5.2
Median RPKM: 22.3

GTEX-133LE-0626-SM-5IFFJ

20-29 years, female

40.0

GTEX-TMMY-1126-SM-4DXSX

40-49 years, female

39.6

GTEX-ZTX8-0226-SM-5E44D

20-29 years, male

38.0

GTEX-T5JW-1326-SM-4DM5G

20-29 years, female

36.3

GTEX-RUSQ-0826-SM-47JWW

50-59 years, male

33.9

GTEX-13X6H-1326-SM-5LU42

50-59 years, female

33.4

GTEX-13O1R-1326-SM-5IJF5

60-69 years, male

33.3

GTEX-1399U-1026-SM-5J1OC

50-59 years, female

33.0

GTEX-11TT1-0526-SM-5P9JO

20-29 years, male

32.9

GTEX-RU72-0726-SM-46MUW

50-59 years, female

32.7

Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million	45.1

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 45.1

FF:10015-101C6

68,74,75 years, mixed

45.1